Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 MT-RNR1-201ENST00000389680 954 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RNU6-316P-201ENST00000391027 107 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 PTMAP3-201ENST00000447474 330 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 FTH1P25-201ENST00000447665 469 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RPL7P49-201ENST00000471402 708 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 TRMT10BP1-201ENST00000519377 943 ntBASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM3Q8TF72 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC120036.2-201ENST00000509729 1474 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 Z95327.2-201ENST00000414579 1873 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AL035696.2-201ENST00000407941 709 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 RN7SKP199-201ENST00000410325 305 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 COX6B1P7-201ENST00000430845 235 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC007389.2-201ENST00000434630 306 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 UQCRHP4-201ENST00000471686 272 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC010547.7-201ENST00000570323 333 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC107993.1-201ENST00000591343 684 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC079587.1-201ENST00000603846 277 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC025175.1-201ENST00000606482 759 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AL021997.2-201ENST00000615674 271 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC095038.2-201ENST00000621464 1070 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC138907.10-201ENST00000623708 983 ntBASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM3Q8TF72 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AL161909.1-201ENST00000397390 712 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC233289.1-201ENST00000403700 508 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 NPM1P38-201ENST00000403835 865 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 OR8G2P-201ENST00000412796 908 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 YY1P1-201ENST00000427625 668 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 RPL21P89-201ENST00000444021 467 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 RAD23BP3-201ENST00000454157 1152 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 RN7SL303P-201ENST00000469773 251 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 MTND6P33-201ENST00000571794 183 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC087499.8-201ENST00000578406 226 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC019176.2-201ENST00000611579 315 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC116667.1-201ENST00000604855 2072 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 RPS27AP11-201ENST00000402798 447 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 RAB9AP4-201ENST00000415230 609 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AL050321.1-201ENST00000432363 400 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 RPL23AP89-201ENST00000439324 255 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC104978.1-201ENST00000449387 391 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 ASNSP4-201ENST00000511103 447 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC108064.1-201ENST00000513791 460 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 MIR3944-201ENST00000581277 108 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 AC110743.1-201ENST00000584870 478 ntBASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM3Q8TF72 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
SHROOM3Q8TF72 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms