Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RPL23AP97-201ENST00000568955 471 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AL645927.2-201ENST00000618350 349 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 PRDX3P3-201ENST00000447765 522 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RPL7P22-201ENST00000466005 733 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AC006349.1-201ENST00000555526 235 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AL136164.3-201ENST00000624429 3978 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 BTF3P6-201ENST00000448054 499 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AC021146.3-201ENST00000511911 260 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 MIR4325-201ENST00000583049 90 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AC055839.1-201ENST00000634467 498 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 RPL37P3-201ENST00000456825 293 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AL139099.1-201ENST00000497398 403 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 HPRT1P2-201ENST00000505250 544 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC110743.1-201ENST00000584870 478 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC015871.5-202ENST00000623252 701 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AL356274.2-201ENST00000624379 3752 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 OR6K3-202ENST00000368146 996 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 EIF4A1P1-201ENST00000420241 934 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 Z74696.2-201ENST00000436514 498 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 RPS11P1-201ENST00000451072 473 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC008481.1-201ENST00000463278 396 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 USP9YP2-201ENST00000504503 1000 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 USP9YP1-201ENST00000513521 1002 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 RNA5SP303-201ENST00000516192 130 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC244505.7-201ENST00000599675 272 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ELOCP35-201ENST00000604289 336 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 MIR6868-201ENST00000611215 58 ntBASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ALMS1Q8TCU4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 OR4K6P-201ENST00000416478 897 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms