Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 RN7SKP97-201ENST00000410966 333 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 COX6CP13-201ENST00000428703 226 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 HMGB3P5-201ENST00000428894 612 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 MTCO3P21-201ENST00000430791 643 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 YWHAEP5-201ENST00000431545 765 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 GTF2IP3-201ENST00000433887 494 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC093414.1-201ENST00000434712 514 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC068135.1-201ENST00000446164 246 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC004980.3-201ENST00000447046 365 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AL935212.3-201ENST00000450729 284 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 RPL7AP52-201ENST00000458096 790 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 RPS29P22-201ENST00000472363 168 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 GAPDHP56-201ENST00000506031 988 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 PRELID3BP4-201ENST00000515476 571 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 MIR3667-201ENST00000581025 74 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC106052.1-201ENST00000608029 497 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AP001521.2-201ENST00000608772 546 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC055764.2-201ENST00000610089 670 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC109809.1-201ENST00000619665 545 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 AC006840.1-201ENST00000623069 542 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 SAMMSON-226ENST00000642089 1582 ntBASIC4.59□□□□□ -1.67
BEST3Q8N1M1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
BEST3Q8N1M1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
BEST3Q8N1M1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.59□□□□□ -1.68
BEST3Q8N1M1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BEST3Q8N1M1 AL672167.1-204ENST00000641875 3017 ntBASIC4.59□□□□□ -1.68
BEST3Q8N1M1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 MCTS2P-201ENST00000394552 546 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 OR51B3P-201ENST00000412287 913 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC007738.1-201ENST00000413892 348 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 RPL26P29-201ENST00000415623 438 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AL449283.1-202ENST00000418249 604 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC092634.2-201ENST00000428146 1010 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 RPS24P8-201ENST00000431490 402 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 OR10R1P-201ENST00000441524 1141 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC244505.3-201ENST00000454598 187 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 CDC42P1-201ENST00000456658 548 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 SNORD11.1-201ENST00000459482 85 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 RPS3AP6-201ENST00000484430 795 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms