Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.28□□□□□ -1.72
NUDCD3Q8IVD9 AL445437.1-201ENST00000623157 3087 ntBASIC4.28□□□□□ -1.72
NUDCD3Q8IVD9 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.28□□□□□ -1.72
NUDCD3Q8IVD9 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.28□□□□□ -1.72
NUDCD3Q8IVD9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUDCD3Q8IVD9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.28□□□□□ -1.72
NUDCD3Q8IVD9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
NUDCD3Q8IVD9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 RNU6-819P-201ENST00000364116 107 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 MIR3065-201ENST00000390137 79 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 RNA5SP306-201ENST00000411087 107 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 YWHAEP5-201ENST00000431545 765 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 GSTA7P-201ENST00000438425 448 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 ARL5AP3-201ENST00000439327 386 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 RPL7AP52-201ENST00000458096 790 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 EIF2S2P4-201ENST00000461070 984 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AC104629.2-201ENST00000468627 598 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AC092868.3-201ENST00000560515 784 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 OR7E18P-201ENST00000592589 702 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AL049555.1-201ENST00000562834 1933 ntBASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUDCD3Q8IVD9 AC114546.3-201ENST00000623582 1734 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 RNU6-146P-201ENST00000384602 108 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC097374.1-203ENST00000400783 485 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 RFESDP1-201ENST00000422350 461 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 EIF1P3-201ENST00000423841 334 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AL132765.1-201ENST00000434165 553 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 MTCYBP29-201ENST00000436327 1006 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 METTL15P1-201ENST00000481421 1045 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 RPS26P15-201ENST00000488067 348 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 RN7SL808P-201ENST00000496066 299 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 OR5M2P-201ENST00000529003 936 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 OR5BC1P-201ENST00000529327 739 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC027176.2-201ENST00000559166 746 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC068714.1-201ENST00000559623 800 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC044860.2-201ENST00000561005 179 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 MTCO2P22-201ENST00000603246 681 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC016769.4-201ENST00000616893 535 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 RMST_9.1-201ENST00000619945 193 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 AC007342.7-201ENST00000624610 2337 ntBASIC4.26□□□□□ -1.73
NUDCD3Q8IVD9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AL034374.1-201ENST00000406329 351 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 CACYBPP1-201ENST00000438592 684 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms