Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC233266.2-201ENST00000567067 528 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 SS18L2P2-201ENST00000583960 235 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RPL7P50-201ENST00000600588 727 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC093765.1-201ENST00000603758 881 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 KATNBL1P5-201ENST00000605015 517 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC034236.3-201ENST00000605999 461 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC004775.1-201ENST00000607389 753 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL135786.2-201ENST00000608422 615 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC007497.1-201ENST00000610421 561 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 MIR7154-201ENST00000620673 73 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC097372.4-201ENST00000625025 466 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC007382.1-201ENST00000624376 2618 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC026951.1-201ENST00000559530 2459 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 IGKV7-3-201ENST00000357453 298 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 RNU6-31P-201ENST00000384388 108 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 U3.30-201ENST00000391308 210 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 OR51B3P-201ENST00000412287 913 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 ATG4AP1-201ENST00000416893 538 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 PDSS1P1-201ENST00000422953 1114 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 CNOT7P1-201ENST00000429006 852 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC012497.1-201ENST00000429392 575 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 GEMIN8P3-201ENST00000445417 720 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 NDUFB4P12-201ENST00000513465 390 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 IGHV3-63-201ENST00000518422 341 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC009643.1-201ENST00000532030 391 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 NOP56P3-201ENST00000549457 385 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC133555.2-201ENST00000550213 292 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC084373.1-201ENST00000603311 235 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC135178.6-201ENST00000605314 398 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AL645927.2-201ENST00000618350 349 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 AC092435.4-201ENST00000623012 4159 ntBASIC4.31□□□□□ -1.72
CCDC71Q8IV32 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CCDC71Q8IV32 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 MIR708-201ENST00000390708 88 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 U3.22-201ENST00000391120 215 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 LAP3P1-201ENST00000403648 294 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AL353692.2-201ENST00000407054 335 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC114755.2-201ENST00000413520 361 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AL590609.2-201ENST00000421430 368 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 RPS12P5-201ENST00000423449 371 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 MORF4L1P7-201ENST00000426038 703 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 RPL23AP4-201ENST00000427757 463 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AP000949.1-201ENST00000438328 629 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC006326.1-201ENST00000445465 787 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 RPS23P7-201ENST00000466210 444 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC068587.1-201ENST00000483613 781 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC027338.1-201ENST00000514840 825 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 RNU2-30P-201ENST00000516209 141 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 MTND1P36-201ENST00000522384 936 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 MIR4277-201ENST00000578298 84 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 MIR4715-201ENST00000584117 79 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms