Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 RPL7P28-201ENST00000437739 740 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 EEF1A1P1-201ENST00000447052 739 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 MTND2P25-201ENST00000449028 610 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC022431.1-201ENST00000450941 438 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC009220.1-201ENST00000451614 275 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC108145.1-201ENST00000503770 153 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 MIR4284-201ENST00000578924 81 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 AF230666.2-201ENST00000602328 725 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC008782.1-201ENST00000603386 430 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 QTRT1P1-201ENST00000604344 1078 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 HMGB1P50-201ENST00000605814 607 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 AL035461.2-201ENST00000619201 524 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 LINC01808-202ENST00000641680 1116 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 AC010300.1-201ENST00000600671 5134 ntBASIC3.82□□□□□ -1.8
LRRC28Q86X40 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
LRRC28Q86X40 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 MIR141-201ENST00000384975 95 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 DPY19L1P2-201ENST00000426647 915 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 RPL23AP93-201ENST00000440847 484 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 TPTE2P3-201ENST00000441562 1189 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 S100A11P1-201ENST00000477525 312 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC092593.2-201ENST00000513866 913 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 RN7SKP34-201ENST00000516142 244 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC020914.4-201ENST00000597690 277 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC115286.1-201ENST00000604298 434 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AL356218.2-201ENST00000605264 187 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AL034374.2-201ENST00000605281 548 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AL023583.1-201ENST00000607518 1143 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC017076.1-201ENST00000607613 578 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AP006248.2-201ENST00000623309 592 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 RAD17P1-201ENST00000418130 2042 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 AC093311.1-201ENST00000506586 2021 ntBASIC3.81□□□□□ -1.8
LRRC28Q86X40 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC28Q86X40 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC28Q86X40 CR382285.2-201ENST00000624662 1495 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC28Q86X40 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC139713.2-214ENST00000642059 1811 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 RNA5SP447-201ENST00000363749 119 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 ELOCP19-201ENST00000411919 318 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 HMGB1P32-201ENST00000425971 565 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 AL158073.1-201ENST00000426848 1104 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 RPS26P47-201ENST00000427219 348 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 AL353597.2-202ENST00000434901 373 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 Z95152.1-201ENST00000453556 656 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 AL592156.1-201ENST00000508758 304 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC034205.1-201ENST00000520621 638 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 C1GALT1P3-201ENST00000522049 819 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC28Q86X40 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 OR6R2P-201ENST00000609216 300 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms