Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC122688.1-201ENST00000541494 223 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 MIR4311-201ENST00000580794 100 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC008088.1-201ENST00000580993 280 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL592221.1-201ENST00000605266 382 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL122125.1-201ENST00000616999 600 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC015908.5-201ENST00000623289 343 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC073593.1-201ENST00000624500 411 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL031119.1-201ENST00000404707 1879 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC107081.3-201ENST00000612715 2034 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 IL6STP1-201ENST00000346911 1020 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 OR5H2-201ENST00000355273 945 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC004386.1-201ENST00000393214 761 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 LUZP4P1-201ENST00000415420 344 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 MTCO3P1-205ENST00000422088 832 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 MTND4P20-201ENST00000424125 869 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 B3GNT2P1-201ENST00000434960 952 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 RPL12P46-201ENST00000436610 195 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 MTND2P22-201ENST00000444325 1033 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AL109741.2-201ENST00000455561 343 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AL591473.1-201ENST00000464297 313 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 NIFKP7-201ENST00000503365 834 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 SNORA48.10-201ENST00000516965 160 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 RNU6-1261P-201ENST00000517194 104 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC105185.1-201ENST00000518705 535 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 ARL2BPP5-201ENST00000523141 481 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 GCSHP4-201ENST00000538792 439 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 ELOCP32-201ENST00000548625 324 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC063949.1-201ENST00000552900 865 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC138915.2-201ENST00000569776 97 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC063977.5-201ENST00000601044 974 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC009779.8-202ENST00000607990 932 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC007204.2-201ENST00000615022 616 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC037198.3-201ENST00000616754 526 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 SGO1P2-201ENST00000429458 1589 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 SSXP3-201ENST00000442971 1300 ntBASIC5.2□□□□□ -1.58
RNF220Q5VTB9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF220Q5VTB9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms