Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 AC027287.1-201ENST00000553115 1453 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC066616.2-201ENST00000559334 1481 ntBASIC3.75□□□□□ -1.81
USF2Q15853 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
USF2Q15853 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
USF2Q15853 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 RPL23P2-201ENST00000320371 421 ntBASIC3.75□□□□□ -1.81
USF2Q15853 RNA5SP428-201ENST00000365129 132 ntBASIC3.75□□□□□ -1.81
USF2Q15853 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 RNU6-171P-201ENST00000384354 107 ntBASIC3.75□□□□□ -1.81
USF2Q15853 Z97832.1-201ENST00000402490 328 ntBASIC3.75□□□□□ -1.81
USF2Q15853 RN7SKP216-201ENST00000411050 312 ntBASIC3.75□□□□□ -1.81
USF2Q15853 VDAC1P9-201ENST00000412766 841 ntBASIC3.75□□□□□ -1.81
USF2Q15853 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.75□□□□□ -1.81
USF2Q15853 AC016769.2-201ENST00000414815 475 ntBASIC3.75□□□□□ -1.81
USF2Q15853 BX510359.3-201ENST00000422168 306 ntBASIC3.75□□□□□ -1.81
USF2Q15853 RPS24P8-201ENST00000431490 402 ntBASIC3.75□□□□□ -1.81
USF2Q15853 YWHAEP5-201ENST00000431545 765 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 AC007563.3-201ENST00000433233 371 ntBASIC3.75□□□□□ -1.81
USF2Q15853 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.75□□□□□ -1.81
USF2Q15853 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 RPL7P33-201ENST00000444159 742 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 EIF2S2P2-201ENST00000447161 982 ntBASIC3.75□□□□□ -1.81
USF2Q15853 SLC25A18P1-201ENST00000449385 454 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 RN7SL97P-201ENST00000486780 299 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 USP9YP5-201ENST00000511770 630 ntBASIC3.75□□□□□ -1.81
USF2Q15853 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 RNU6-709P-201ENST00000517257 104 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.75□□□□□ -1.81
USF2Q15853 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 AC051619.2-201ENST00000559063 397 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC092868.3-201ENST00000560515 784 ntBASIC3.75□□□□□ -1.81
USF2Q15853 SNORA74C-1-201ENST00000580726 201 ntBASIC3.75□□□□□ -1.81
USF2Q15853 MIR548Y-201ENST00000582739 110 ntBASIC3.75□□□□□ -1.81
USF2Q15853 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 MEMO1P5-201ENST00000604810 406 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC211433.2-201ENST00000608433 387 ntBASIC3.75□□□□□ -1.81
USF2Q15853 MIR7973-1-201ENST00000614683 76 ntBASIC3.75□□□□□ -1.81
USF2Q15853 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AL022401.1-201ENST00000619498 108 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 AC243960.7-201ENST00000623532 707 ntBASIC3.75□□□□□ -1.81
USF2Q15853 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.75□□□□□ -1.81
USF2Q15853 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.75□□□□□ -1.81
USF2Q15853 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.75□□□□□ -1.81
USF2Q15853 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF2Q15853 GABPAP-201ENST00000419271 1356 ntBASIC3.75□□□□□ -1.81
USF2Q15853 AL590763.1-201ENST00000398297 1545 ntBASIC3.75□□□□□ -1.81
USF2Q15853 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.75□□□□□ -1.81
USF2Q15853 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 AC010300.1-201ENST00000600671 5134 ntBASIC3.74□□□□□ -1.81
USF2Q15853 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 SEPT7P7-201ENST00000420492 1301 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 A2MP1-204ENST00000566278 4130 ntBASIC3.74□□□□□ -1.81
USF2Q15853 NMD3P1-201ENST00000439704 1488 ntBASIC3.74□□□□□ -1.81
USF2Q15853 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.74□□□□□ -1.81
USF2Q15853 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 AL021331.1-201ENST00000402817 582 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 AC010740.1-201ENST00000417035 684 ntBASIC3.74□□□□□ -1.81
USF2Q15853 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.74□□□□□ -1.81
USF2Q15853 PTP4A1P5-201ENST00000420305 455 ntBASIC3.74□□□□□ -1.81
USF2Q15853 LINC00993-201ENST00000420453 540 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.74□□□□□ -1.81
USF2Q15853 RPS7P5-201ENST00000441482 581 ntBASIC3.74□□□□□ -1.81
USF2Q15853 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.74□□□□□ -1.81
USF2Q15853 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 RN7SL481P-201ENST00000477764 299 ntBASIC3.74□□□□□ -1.81
USF2Q15853 BX284632.1-201ENST00000478218 541 ntBASIC3.74□□□□□ -1.81
USF2Q15853 RN7SL319P-201ENST00000480656 221 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC090142.2-201ENST00000483263 416 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AP001086.1-201ENST00000494882 321 ntBASIC3.74□□□□□ -1.81
USF2Q15853 NIPA2P2-201ENST00000496376 1083 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC104164.2-201ENST00000496953 495 ntBASIC3.74□□□□□ -1.81
USF2Q15853 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms