Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.46□□□□□ -2.01
HSPG2P98160 CCAT2-201ENST00000630920 1752 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 LYST-202ENST00000389794 12985 ntTSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.46□□□□□ -2.02
HSPG2P98160 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 AL731532.2-201ENST00000623542 1953 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 UBE2V1P1-201ENST00000430836 445 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC2.46□□□□□ -2.02
HSPG2P98160 RNA5SP179-201ENST00000517284 121 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 CYCSP30-201ENST00000546447 172 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC064801.1-201ENST00000612025 407 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC119674.1-212ENST00000641155 993 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AL359922.3-201ENST00000624779 1670 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
HSPG2P98160 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 CDY3P-201ENST00000454543 1618 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 MIR1179-201ENST00000408703 91 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC008065.1-201ENST00000428525 348 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC128716.1-201ENST00000475129 166 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 RPL5P23-201ENST00000496040 868 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.46□□□□□ -2.02
HSPG2P98160 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.46□□□□□ -2.02
HSPG2P98160 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.46□□□□□ -2.02
HSPG2P98160 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 AL353743.1-202ENST00000431724 1695 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.46□□□□□ -2.02
HSPG2P98160 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 RPS21P8-201ENST00000413365 247 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.46□□□□□ -2.02
HSPG2P98160 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 RPS29P19-201ENST00000479709 171 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.46□□□□□ -2.02
HSPG2P98160 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC2.46□□□□□ -2.02
HSPG2P98160 AC091544.4-201ENST00000555268 342 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 NPM1P5-201ENST00000557228 838 ntBASIC2.46□□□□□ -2.02
HSPG2P98160 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.46□□□□□ -2.02
HSPG2P98160 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HSPG2P98160 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HSPG2P98160 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 RNA5SP126-201ENST00000365092 109 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC007738.1-201ENST00000413892 348 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.45□□□□□ -2.02
HSPG2P98160 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.45□□□□□ -2.02
HSPG2P98160 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.45□□□□□ -2.02
HSPG2P98160 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.45□□□□□ -2.02
HSPG2P98160 CCRL1P1-201ENST00000449542 1053 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC069306.1-201ENST00000507006 843 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 RPL7L1P13-201ENST00000511702 739 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AP002360.3-201ENST00000607673 710 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 ZNF962P-201ENST00000443465 3140 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 PCNPP4-201ENST00000414817 517 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 RPS26P4-201ENST00000431743 355 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 RPS17P13-201ENST00000448974 407 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.45□□□□□ -2.02
HSPG2P98160 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AL713922.2-201ENST00000619384 716 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms