Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FAM27D1-201ENST00000612308 341 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.84□□□□□ -1.79
H3F3AP84243 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3F3AP84243 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3F3AP84243 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3AP84243 AC068254.2-201ENST00000623938 3577 ntBASIC3.84□□□□□ -1.8
H3F3AP84243 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
H3F3AP84243 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3AP84243 AL158163.1-201ENST00000603915 1649 ntBASIC3.84□□□□□ -1.8
H3F3AP84243 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
H3F3AP84243 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.83□□□□□ -1.8
H3F3AP84243 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
H3F3AP84243 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 AC067945.1-201ENST00000342609 618 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
H3F3AP84243 RNA5SP52-201ENST00000362448 134 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 RNU1-14P-201ENST00000362759 152 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 RNA5SP366-201ENST00000365454 123 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 RN7SKP235-201ENST00000410662 305 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 GSTM3P2-201ENST00000412746 530 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 NRBF2P2-201ENST00000413087 861 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 GAPDHP49-201ENST00000421421 961 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC099336.2-201ENST00000422457 254 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AL353597.2-202ENST00000434901 373 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 RAB9AP5-201ENST00000437794 597 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 ACTR3P2-201ENST00000439585 1257 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 RAB9AP2-201ENST00000443911 597 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC009963.2-201ENST00000453431 138 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AC099560.2-201ENST00000457554 255 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC091167.1-201ENST00000492017 396 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.83□□□□□ -1.8
H3F3AP84243 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC093840.1-201ENST00000511599 336 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 NDUFB4P12-201ENST00000513465 390 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.83□□□□□ -1.8
H3F3AP84243 RNA5SP49-201ENST00000516450 115 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 MTCYBP19-201ENST00000517463 1124 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 VTA1P2-201ENST00000520205 911 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.83□□□□□ -1.8
H3F3AP84243 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.83□□□□□ -1.8
H3F3AP84243 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC068446.3-201ENST00000555285 382 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.83□□□□□ -1.8
H3F3AP84243 PSMB7P1-201ENST00000556349 514 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AC124068.1-201ENST00000563131 678 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3AP84243 AC119501.1-201ENST00000603646 475 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AL445363.3-201ENST00000623080 671 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AC011944.2-201ENST00000624440 683 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 AC008013.2-202ENST00000637965 364 ntBASIC3.83□□□□□ -1.8
H3F3AP84243 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.83□□□□□ -1.8
H3F3AP84243 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
H3F3AP84243 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3AP84243 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3AP84243 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3AP84243 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 RNU4-25P-201ENST00000410569 230 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 AL158073.1-201ENST00000426848 1104 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 NANOGP6-201ENST00000429190 847 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 BX119904.1-201ENST00000432026 348 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 CEACAMP1-201ENST00000434624 1035 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 MTND2P2-201ENST00000434633 945 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3AP84243 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 AL451050.1-201ENST00000450126 415 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AL162388.1-201ENST00000450912 352 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3AP84243 RN7SL481P-201ENST00000477764 299 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AC008958.1-201ENST00000511047 682 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3AP84243 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3AP84243 MTND2P13-201ENST00000577438 1039 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3AP84243 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 VN1R81P-201ENST00000602085 372 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3AP84243 AL139395.1-201ENST00000603662 160 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AL023583.1-201ENST00000607518 1143 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AC023509.5-201ENST00000617434 807 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms