Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VCPP55072 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.89□□□□□ -1.63
VCPP55072 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.89□□□□□ -1.63
VCPP55072 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 OR52B1P-201ENST00000316506 909 ntBASIC4.89□□□□□ -1.63
VCPP55072 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 RNU1-13P-201ENST00000384499 162 ntBASIC4.89□□□□□ -1.63
VCPP55072 AL590762.2-201ENST00000395798 571 ntBASIC4.89□□□□□ -1.63
VCPP55072 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.89□□□□□ -1.63
VCPP55072 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.89□□□□□ -1.63
VCPP55072 MTCYBP7-201ENST00000419540 1134 ntBASIC4.89□□□□□ -1.63
VCPP55072 AC099336.2-201ENST00000422457 254 ntBASIC4.89□□□□□ -1.63
VCPP55072 RPS26P47-201ENST00000427219 348 ntBASIC4.89□□□□□ -1.63
VCPP55072 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.89□□□□□ -1.63
VCPP55072 RPL23AP83-201ENST00000434984 473 ntBASIC4.89□□□□□ -1.63
VCPP55072 AL357520.1-201ENST00000441557 453 ntBASIC4.89□□□□□ -1.63
VCPP55072 RSL24D1P2-201ENST00000445584 366 ntBASIC4.89□□□□□ -1.63
VCPP55072 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.89□□□□□ -1.63
VCPP55072 AC099560.2-201ENST00000457554 255 ntBASIC4.89□□□□□ -1.63
VCPP55072 LARP7P4-201ENST00000481075 878 ntBASIC4.89□□□□□ -1.63
VCPP55072 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.89□□□□□ -1.63
VCPP55072 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.89□□□□□ -1.63
VCPP55072 PGBD4P4-201ENST00000509673 613 ntBASIC4.89□□□□□ -1.63
VCPP55072 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.89□□□□□ -1.63
VCPP55072 RNU6-319P-201ENST00000516025 108 ntBASIC4.89□□□□□ -1.63
VCPP55072 RNU1-6P-201ENST00000516290 144 ntBASIC4.89□□□□□ -1.63
VCPP55072 RNU1-45P-201ENST00000517191 141 ntBASIC4.89□□□□□ -1.63
VCPP55072 IGLVIV-65-201ENST00000517313 360 ntBASIC4.89□□□□□ -1.63
VCPP55072 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.89□□□□□ -1.63
VCPP55072 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.89□□□□□ -1.63
VCPP55072 AC005520.3-201ENST00000602874 370 ntBASIC4.89□□□□□ -1.63
VCPP55072 OR7A19P-201ENST00000608051 733 ntBASIC4.89□□□□□ -1.63
VCPP55072 AC020658.4-201ENST00000613987 684 ntBASIC4.89□□□□□ -1.63
VCPP55072 AC005086.4-201ENST00000623065 213 ntBASIC4.89□□□□□ -1.63
VCPP55072 AC011815.3-201ENST00000624194 473 ntBASIC4.89□□□□□ -1.63
VCPP55072 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.89□□□□□ -1.63
VCPP55072 A2MP1-204ENST00000566278 4130 ntBASIC4.89□□□□□ -1.63
VCPP55072 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
VCPP55072 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.89□□□□□ -1.63
VCPP55072 AC007382.1-201ENST00000624376 2618 ntBASIC4.89□□□□□ -1.63
VCPP55072 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VCPP55072 VN2R3P-201ENST00000422626 1412 ntBASIC4.89□□□□□ -1.63
VCPP55072 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 MAPK10-320ENST00000641462 6696 ntBASIC4.88□□□□□ -1.63
VCPP55072 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VCPP55072 ZFRP1-201ENST00000457579 2970 ntBASIC4.88□□□□□ -1.63
VCPP55072 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
VCPP55072 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 RNA5SP317-201ENST00000410176 116 ntBASIC4.88□□□□□ -1.63
VCPP55072 RNA5SP311-201ENST00000411290 116 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
VCPP55072 Z74021.1-201ENST00000423610 407 ntBASIC4.88□□□□□ -1.63
VCPP55072 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 XKRYP6-201ENST00000440468 1116 ntBASIC4.88□□□□□ -1.63
VCPP55072 XKRYP3-201ENST00000442113 1116 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 CCDC75P1-201ENST00000469247 791 ntBASIC4.88□□□□□ -1.63
VCPP55072 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 RNA5SP315-201ENST00000516340 116 ntBASIC4.88□□□□□ -1.63
VCPP55072 SNORA48.9-201ENST00000516419 162 ntBASIC4.88□□□□□ -1.63
VCPP55072 RNA5SP312-201ENST00000517068 116 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC022882.1-201ENST00000532142 501 ntBASIC4.88□□□□□ -1.63
VCPP55072 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 OR8R1P-201ENST00000543943 764 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC105129.1-201ENST00000560250 297 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.88□□□□□ -1.63
VCPP55072 AC073137.1-201ENST00000605636 634 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC090948.1-201ENST00000607464 549 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC099676.1-201ENST00000608886 657 ntBASIC4.88□□□□□ -1.63
VCPP55072 SNX18P1Y-201ENST00000616231 511 ntBASIC4.88□□□□□ -1.63
VCPP55072 MIR6075-201ENST00000620782 95 ntBASIC4.88□□□□□ -1.63
VCPP55072 BMS1P21-201ENST00000634565 365 ntBASIC4.88□□□□□ -1.63
VCPP55072 AL627171.1-201ENST00000618845 1308 ntBASIC4.88□□□□□ -1.63
VCPP55072 HSPD1P11-201ENST00000508643 1702 ntBASIC4.88□□□□□ -1.63
VCPP55072 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 AL031119.1-201ENST00000404707 1879 ntBASIC4.88□□□□□ -1.63
VCPP55072 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.88□□□□□ -1.63
VCPP55072 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VCPP55072 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms