Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-1218P-201ENST00000458990 108 ntBASIC5.36□□□□□ -1.55
COPAP53621 AC005410.1-202ENST00000460347 485 ntBASIC5.36□□□□□ -1.55
COPAP53621 RPL23AP12-201ENST00000467573 473 ntBASIC5.36□□□□□ -1.55
COPAP53621 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.36□□□□□ -1.55
COPAP53621 IGBP1P4-201ENST00000503202 879 ntBASIC5.36□□□□□ -1.55
COPAP53621 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.36□□□□□ -1.55
COPAP53621 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.36□□□□□ -1.55
COPAP53621 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.36□□□□□ -1.55
COPAP53621 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.36□□□□□ -1.55
COPAP53621 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.36□□□□□ -1.55
COPAP53621 AC092490.3-201ENST00000545370 572 ntBASIC5.36□□□□□ -1.55
COPAP53621 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.36□□□□□ -1.55
COPAP53621 MTND4P33-201ENST00000556706 766 ntBASIC5.36□□□□□ -1.55
COPAP53621 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.36□□□□□ -1.55
COPAP53621 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.36□□□□□ -1.55
COPAP53621 AL583856.2-201ENST00000606298 543 ntBASIC5.36□□□□□ -1.55
COPAP53621 AC090948.2-201ENST00000607363 564 ntBASIC5.36□□□□□ -1.55
COPAP53621 AL136295.6-201ENST00000610486 658 ntBASIC5.36□□□□□ -1.55
COPAP53621 AL138478.1-201ENST00000612252 832 ntBASIC5.36□□□□□ -1.55
COPAP53621 AP002782.1-201ENST00000623107 614 ntBASIC5.36□□□□□ -1.55
COPAP53621 OR1S1-201ENST00000624470 978 ntBASIC5.36□□□□□ -1.55
COPAP53621 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.36□□□□□ -1.55
COPAP53621 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPAP53621 MTND4P10-201ENST00000446199 1363 ntBASIC5.36□□□□□ -1.55
COPAP53621 MTCO1P6-201ENST00000481192 1384 ntBASIC5.36□□□□□ -1.55
COPAP53621 PANDAR-201ENST00000629595 1506 ntBASIC5.36□□□□□ -1.55
COPAP53621 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPAP53621 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COPAP53621 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.36□□□□□ -1.55
COPAP53621 THAP12P5-201ENST00000405864 2275 ntBASIC5.36□□□□□ -1.55
COPAP53621 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COPAP53621 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COPAP53621 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COPAP53621 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 MTND4P31-201ENST00000425607 1343 ntBASIC5.35□□□□□ -1.55
COPAP53621 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 RNU6-146P-201ENST00000384602 108 ntBASIC5.35□□□□□ -1.55
COPAP53621 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 KRR1P1-201ENST00000419430 803 ntBASIC5.35□□□□□ -1.55
COPAP53621 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.35□□□□□ -1.55
COPAP53621 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 AC084290.1-201ENST00000434995 374 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 HMGB1P45-201ENST00000435986 653 ntBASIC5.35□□□□□ -1.55
COPAP53621 TPTE2P6-202ENST00000445572 1007 ntBASIC5.35□□□□□ -1.55
COPAP53621 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 AC112492.1-201ENST00000449607 712 ntBASIC5.35□□□□□ -1.55
COPAP53621 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 AC092647.2-201ENST00000452998 253 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC091685.2-201ENST00000454924 864 ntBASIC5.35□□□□□ -1.55
COPAP53621 HMGB1P4-201ENST00000455362 567 ntBASIC5.35□□□□□ -1.55
COPAP53621 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 NIP7P2-201ENST00000485801 544 ntBASIC5.35□□□□□ -1.55
COPAP53621 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 EIF3KP3-201ENST00000514461 639 ntBASIC5.35□□□□□ -1.55
COPAP53621 HMGN1P9-201ENST00000515212 298 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 HMGB1P23-201ENST00000518743 568 ntBASIC5.35□□□□□ -1.55
COPAP53621 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
COPAP53621 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.35□□□□□ -1.55
COPAP53621 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.35□□□□□ -1.55
COPAP53621 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 AC145350.1-201ENST00000567426 208 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC090312.1-201ENST00000580637 348 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 AC025588.2-201ENST00000604851 466 ntBASIC5.35□□□□□ -1.55
COPAP53621 AL049539.1-201ENST00000611964 459 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC009704.2-201ENST00000618739 483 ntBASIC5.35□□□□□ -1.55
COPAP53621 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 VN1R7P-201ENST00000619242 903 ntBASIC5.35□□□□□ -1.55
COPAP53621 AC099494.2-201ENST00000623371 978 ntBASIC5.35□□□□□ -1.55
COPAP53621 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
COPAP53621 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPAP53621 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.35□□□□□ -1.55
COPAP53621 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms