Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MSH6P52701 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSH6P52701 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MSH6P52701 AC005261.6-201ENST00000623072 1387 ntBASIC5.83□□□□□ -1.48
MSH6P52701 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSH6P52701 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
MSH6P52701 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MSH6P52701 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MSH6P52701 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.83□□□□□ -1.48
MSH6P52701 RN7SKP74-201ENST00000362849 309 ntBASIC5.82□□□□□ -1.48
MSH6P52701 MIR218-2-201ENST00000385006 110 ntBASIC5.82□□□□□ -1.48
MSH6P52701 AP000907.1-201ENST00000428428 510 ntBASIC5.82□□□□□ -1.48
MSH6P52701 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.82□□□□□ -1.48
MSH6P52701 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.82□□□□□ -1.48
MSH6P52701 AL451050.1-201ENST00000450126 415 ntBASIC5.82□□□□□ -1.48
MSH6P52701 RPS4XP15-201ENST00000489210 795 ntBASIC5.82□□□□□ -1.48
MSH6P52701 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MSH6P52701 AL352979.3-201ENST00000553515 247 ntBASIC5.82□□□□□ -1.48
MSH6P52701 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.82□□□□□ -1.48
MSH6P52701 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH6P52701 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MSH6P52701 BNIP3P41-202ENST00000616656 861 ntBASIC5.82□□□□□ -1.48
MSH6P52701 AC234782.5-201ENST00000617723 324 ntBASIC5.82□□□□□ -1.48
MSH6P52701 U6.105-201ENST00000637379 88 ntBASIC5.82□□□□□ -1.48
MSH6P52701 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH6P52701 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH6P52701 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
MSH6P52701 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MSH6P52701 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MSH6P52701 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.82□□□□□ -1.48
MSH6P52701 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MSH6P52701 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MSH6P52701 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH6P52701 MIR921-201ENST00000401133 56 ntBASIC5.81□□□□□ -1.48
MSH6P52701 HSPE1P12-201ENST00000412576 301 ntBASIC5.81□□□□□ -1.48
MSH6P52701 DPPA2P2-201ENST00000418220 897 ntBASIC5.81□□□□□ -1.48
MSH6P52701 RPL21P91-201ENST00000429231 479 ntBASIC5.81□□□□□ -1.48
MSH6P52701 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.81□□□□□ -1.48
MSH6P52701 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.81□□□□□ -1.48
MSH6P52701 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.81□□□□□ -1.48
MSH6P52701 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.81□□□□□ -1.48
MSH6P52701 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.81□□□□□ -1.48
MSH6P52701 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.81□□□□□ -1.48
MSH6P52701 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.81□□□□□ -1.48
MSH6P52701 OR9M1P-201ENST00000459641 921 ntBASIC5.81□□□□□ -1.48
MSH6P52701 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.81□□□□□ -1.48
MSH6P52701 AC074250.1-201ENST00000511117 192 ntBASIC5.81□□□□□ -1.48
MSH6P52701 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.81□□□□□ -1.48
MSH6P52701 RNA5SP446-201ENST00000515955 82 ntBASIC5.81□□□□□ -1.48
MSH6P52701 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.81□□□□□ -1.48
MSH6P52701 AC107016.1-201ENST00000550463 337 ntBASIC5.81□□□□□ -1.48
MSH6P52701 GTF2IP22-201ENST00000554443 182 ntBASIC5.81□□□□□ -1.48
MSH6P52701 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.81□□□□□ -1.48
MSH6P52701 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.81□□□□□ -1.48
MSH6P52701 AC005972.3-201ENST00000606304 481 ntBASIC5.81□□□□□ -1.48
MSH6P52701 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
MSH6P52701 MTND5P1-201ENST00000445440 1375 ntBASIC5.81□□□□□ -1.48
MSH6P52701 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSH6P52701 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MSH6P52701 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.81□□□□□ -1.48
MSH6P52701 AP001642.1-201ENST00000624727 2117 ntBASIC5.81□□□□□ -1.48
MSH6P52701 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSH6P52701 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
MSH6P52701 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
MSH6P52701 OR56B2P-201ENST00000317102 954 ntBASIC5.8□□□□□ -1.48
MSH6P52701 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.8□□□□□ -1.48
MSH6P52701 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.8□□□□□ -1.48
MSH6P52701 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.8□□□□□ -1.48
MSH6P52701 PTMAP3-201ENST00000447474 330 ntBASIC5.8□□□□□ -1.48
MSH6P52701 ABCF2P2-201ENST00000450549 296 ntBASIC5.8□□□□□ -1.48
MSH6P52701 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.8□□□□□ -1.48
MSH6P52701 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.8□□□□□ -1.48
MSH6P52701 RPS20P21-201ENST00000466859 343 ntBASIC5.8□□□□□ -1.48
MSH6P52701 PPIAP15-201ENST00000479662 484 ntBASIC5.8□□□□□ -1.48
MSH6P52701 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.8□□□□□ -1.48
MSH6P52701 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.8□□□□□ -1.48
MSH6P52701 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.8□□□□□ -1.48
MSH6P52701 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.8□□□□□ -1.48
MSH6P52701 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 AP002360.3-201ENST00000607673 710 ntBASIC5.8□□□□□ -1.48
MSH6P52701 AP001002.2-201ENST00000625137 386 ntBASIC5.8□□□□□ -1.48
MSH6P52701 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
MSH6P52701 Z82217.1-201ENST00000625157 8149 ntBASIC5.8□□□□□ -1.48
MSH6P52701 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
MSH6P52701 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 AC116667.1-201ENST00000604855 2072 ntBASIC5.8□□□□□ -1.48
MSH6P52701 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
MSH6P52701 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.8□□□□□ -1.48
MSH6P52701 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSH6P52701 AL359643.1-201ENST00000404109 423 ntBASIC5.8□□□□□ -1.48
MSH6P52701 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.8□□□□□ -1.48
MSH6P52701 REREP1Y-201ENST00000422655 198 ntBASIC5.8□□□□□ -1.48
MSH6P52701 RPEP2-201ENST00000432149 701 ntBASIC5.8□□□□□ -1.48
MSH6P52701 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.8□□□□□ -1.48
MSH6P52701 REREP2Y-201ENST00000439103 200 ntBASIC5.8□□□□□ -1.48
MSH6P52701 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms