Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HCFC1P51610 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.99□□□□□ -1.77
HCFC1P51610 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 Z74021.1-201ENST00000423610 407 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC1P51610 AL132765.1-201ENST00000434165 553 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC1P51610 AL138787.1-202ENST00000437804 898 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 SEPT7P3-201ENST00000455017 621 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 SNORA84-201ENST00000459229 133 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 AC020593.1-201ENST00000507399 299 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 HMGB3P16-201ENST00000508037 287 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 NPM1P41-201ENST00000512920 831 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.99□□□□□ -1.77
HCFC1P51610 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC096947.1-201ENST00000603233 470 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC079298.2-201ENST00000623885 459 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HCFC1P51610 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 AL158163.1-201ENST00000603915 1649 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 AC021146.4-201ENST00000309229 279 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 SNORA11F-201ENST00000408237 128 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC1P51610 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 RPL35AP21-201ENST00000437667 333 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 MTATP6P14-201ENST00000455189 673 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 AC053481.1-201ENST00000467217 306 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC1P51610 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 MED28P5-201ENST00000528254 438 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC1P51610 AC120053.1-201ENST00000607706 736 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 BNIP3P41-202ENST00000616656 861 ntBASIC3.99□□□□□ -1.77
HCFC1P51610 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC1P51610 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HCFC1P51610 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC1P51610 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.98□□□□□ -1.77
HCFC1P51610 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
HCFC1P51610 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.98□□□□□ -1.77
HCFC1P51610 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.98□□□□□ -1.77
HCFC1P51610 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.98□□□□□ -1.77
HCFC1P51610 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HCFC1P51610 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.98□□□□□ -1.77
HCFC1P51610 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC1P51610 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC1P51610 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC1P51610 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
HCFC1P51610 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HCFC1P51610 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC1P51610 RNU1-85P-201ENST00000364127 164 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 RPL21P65-201ENST00000406094 466 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC1P51610 AL160175.1-201ENST00000428124 247 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.98□□□□□ -1.77
HCFC1P51610 Z80107.1-201ENST00000436830 412 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 RPL23AP43-201ENST00000446445 471 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AC108729.2-201ENST00000476543 840 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 NPM1P29-201ENST00000483112 803 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AC091544.1-201ENST00000484702 348 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC1P51610 RNU6-334P-201ENST00000517072 102 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 Y_RNA.719-201ENST00000517156 106 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AC010376.1-201ENST00000522101 334 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 HAUS1P3-201ENST00000523909 662 ntBASIC3.98□□□□□ -1.77
HCFC1P51610 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC1P51610 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms