Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA1P38398 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA1P38398 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA1P38398 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.98□□□□□ -1.61
BRCA1P38398 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRCA1P38398 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRCA1P38398 Y_RNA.111-201ENST00000363248 100 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA1P38398 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
BRCA1P38398 RPS7P15-201ENST00000415804 584 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 RPL6P9-201ENST00000466502 859 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 AL352979.3-201ENST00000553515 247 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 ELOCP35-201ENST00000604289 336 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 MIR432-201ENST00000606207 94 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 MIR6868-201ENST00000611215 58 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.97□□□□□ -1.61
BRCA1P38398 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA1P38398 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 AL356274.2-201ENST00000624379 3752 ntBASIC4.97□□□□□ -1.61
BRCA1P38398 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA1P38398 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRCA1P38398 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA1P38398 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA1P38398 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
BRCA1P38398 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
BRCA1P38398 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
BRCA1P38398 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.96□□□□□ -1.61
BRCA1P38398 RPS26P24-201ENST00000497656 331 ntBASIC4.96□□□□□ -1.61
BRCA1P38398 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.96□□□□□ -1.61
BRCA1P38398 MIR3922-201ENST00000585192 84 ntBASIC4.96□□□□□ -1.61
BRCA1P38398 AC024023.1-201ENST00000624530 922 ntBASIC4.96□□□□□ -1.61
BRCA1P38398 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
BRCA1P38398 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
BRCA1P38398 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.96□□□□□ -1.62
BRCA1P38398 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BRCA1P38398 RNA5SP267-201ENST00000364893 126 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BRCA1P38398 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.96□□□□□ -1.62
BRCA1P38398 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.96□□□□□ -1.62
BRCA1P38398 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.96□□□□□ -1.62
BRCA1P38398 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.96□□□□□ -1.62
BRCA1P38398 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.96□□□□□ -1.62
BRCA1P38398 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.96□□□□□ -1.62
BRCA1P38398 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.96□□□□□ -1.62
BRCA1P38398 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.96□□□□□ -1.62
BRCA1P38398 AL049873.1-201ENST00000480540 376 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 RNA5SP249-201ENST00000516127 99 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.96□□□□□ -1.62
BRCA1P38398 GTF2IP8-201ENST00000560687 584 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 MIR3124-201ENST00000582636 67 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.96□□□□□ -1.62
BRCA1P38398 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.96□□□□□ -1.62
BRCA1P38398 IMMP1LP1-201ENST00000605170 488 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 AL353726.1-201ENST00000614041 1000 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 AC234782.5-201ENST00000617723 324 ntBASIC4.96□□□□□ -1.62
BRCA1P38398 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
BRCA1P38398 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BRCA1P38398 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
BRCA1P38398 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 HSPD1P21-201ENST00000436541 245 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 RPS3AP46-201ENST00000448352 682 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 PPIAP15-201ENST00000479662 484 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 RPL29P14-201ENST00000495837 428 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 BNIP3P41-201ENST00000503774 571 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 CDH12P2-201ENST00000504393 298 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 RN7SKP18-201ENST00000516005 275 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 NDUFA5P2-201ENST00000519723 344 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 COX6CP4-201ENST00000605798 228 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 AC005344.1-201ENST00000613391 459 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 AL157762.1-201ENST00000619612 415 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 AC138965.3-201ENST00000623875 498 ntBASIC4.95□□□□□ -1.62
BRCA1P38398 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.95□□□□□ -1.62
BRCA1P38398 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA1P38398 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA1P38398 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 SNORA60-201ENST00000362396 134 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 RNA5SP51-201ENST00000364750 119 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 RNVU1-14-201ENST00000384770 164 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC083863.1-201ENST00000438811 231 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 BX510359.1-201ENST00000456973 237 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 TPT1P1-201ENST00000458495 518 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms