Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DPPA2P2-201ENST00000418220 897 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AC246680.2-201ENST00000422106 389 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 DDX39BP1-205ENST00000422507 192 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC244035.1-201ENST00000430042 390 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AC091390.1-201ENST00000433904 331 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 AL121601.2-201ENST00000438019 707 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC011753.3-201ENST00000443436 406 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AP000936.2-201ENST00000447151 681 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDE6BP35913 AC104634.1-201ENST00000452720 462 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.62□□□□□ -1.35
PDE6BP35913 NECAP1P2-201ENST00000455668 727 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 MTAPP1-201ENST00000489154 819 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC093815.1-201ENST00000508637 280 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.62□□□□□ -1.35
PDE6BP35913 RAB9BP1-201ENST00000519581 626 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC109635.6-201ENST00000525487 1113 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 NDUFS5P6-201ENST00000529136 295 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.62□□□□□ -1.35
PDE6BP35913 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.62□□□□□ -1.35
PDE6BP35913 AC090616.2-202ENST00000584248 222 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 MTCO3P22-201ENST00000603219 784 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AF250324.2-201ENST00000608299 610 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AC122133.1-201ENST00000613964 233 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PDE6BP35913 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDE6BP35913 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDE6BP35913 AC005725.1-201ENST00000577346 2607 ntBASIC6.62□□□□□ -1.35
PDE6BP35913 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.62□□□□□ -1.35
PDE6BP35913 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDE6BP35913 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDE6BP35913 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 RNU4-51P-201ENST00000364206 140 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 RNU6-1005P-201ENST00000384519 107 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 TAF9BP2-201ENST00000400856 499 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 OR2AM1P-201ENST00000422137 422 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDE6BP35913 MGAT2P2-201ENST00000427194 797 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.61□□□□□ -1.35
PDE6BP35913 RPL7P56-201ENST00000429441 717 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AC023512.1-201ENST00000444513 499 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 RPL6P5-201ENST00000445678 828 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 IGBP1P3-201ENST00000447449 1000 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 RPL12P39-201ENST00000455456 496 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.61□□□□□ -1.35
PDE6BP35913 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.61□□□□□ -1.35
PDE6BP35913 AC011825.1-201ENST00000484967 388 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AC079203.1-201ENST00000487972 404 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 IGLV2-34-201ENST00000490007 283 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 SUMO1P1-201ENST00000497904 306 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.61□□□□□ -1.35
PDE6BP35913 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.61□□□□□ -1.35
PDE6BP35913 AC122688.1-201ENST00000541494 223 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.61□□□□□ -1.35
PDE6BP35913 SERPINE4P-201ENST00000554978 281 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AL512347.1-201ENST00000566420 503 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 MIR3915-201ENST00000578518 97 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.61□□□□□ -1.35
PDE6BP35913 AF131215.7-201ENST00000602443 707 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDE6BP35913 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 AC010329.2-201ENST00000595195 2737 ntBASIC6.61□□□□□ -1.35
PDE6BP35913 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDE6BP35913 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PDE6BP35913 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PDE6BP35913 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PDE6BP35913 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC092747.4-201ENST00000620519 1861 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms