Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 MIR133B-201ENST00000362210 119 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 RNA5SP46-201ENST00000362370 120 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 RNU1-74P-201ENST00000384108 171 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 SNORD65.1-201ENST00000390889 71 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 OR2AT2P-201ENST00000413438 905 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHA3P29320 AL139421.1-201ENST00000423010 169 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 AL390023.1-201ENST00000428836 262 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC079807.1-201ENST00000429993 481 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC009238.2-201ENST00000431026 355 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 THAP5P1-201ENST00000439089 262 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 CBX1P4-201ENST00000439415 457 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 YWHAQP9-201ENST00000445891 512 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC108734.3-201ENST00000481241 1165 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC090638.1-201ENST00000498296 909 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC104090.1-201ENST00000506341 1171 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 CYCSP22-201ENST00000517555 339 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 IGLVIV-64-201ENST00000518581 301 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 MTCO1P49-201ENST00000523429 802 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 AP001317.1-201ENST00000531194 960 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC090751.1-201ENST00000566966 267 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC135628.1-201ENST00000568867 534 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHA3P29320 BPTFP1-201ENST00000579209 492 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC067773.1-201ENST00000603284 1094 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC106791.2-201ENST00000604680 391 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AL451074.6-201ENST00000608512 729 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.04□□□□□ -1.6
EPHA3P29320 AC023509.5-201ENST00000617434 807 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC118658.2-201ENST00000618697 459 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 AC015871.5-202ENST00000623252 701 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHA3P29320 MIR4278-201ENST00000636094 69 ntBASIC5.04□□□□□ -1.6
EPHA3P29320 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHA3P29320 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHA3P29320 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHA3P29320 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHA3P29320 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.03□□□□□ -1.6
EPHA3P29320 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHA3P29320 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
EPHA3P29320 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.03□□□□□ -1.6
EPHA3P29320 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
EPHA3P29320 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
EPHA3P29320 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
EPHA3P29320 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
EPHA3P29320 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHA3P29320 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHA3P29320 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHA3P29320 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
EPHA3P29320 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
EPHA3P29320 OR52E6-202ENST00000379946 954 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHA3P29320 SNORA11.3-201ENST00000408471 128 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 RNA5SP80-201ENST00000410475 111 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 RN7SKP182-201ENST00000410772 298 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 MORF4L1P6-201ENST00000418771 268 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 AC048351.1-201ENST00000420064 602 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHA3P29320 RPL34P3-201ENST00000421454 338 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 DPRXP1-201ENST00000426312 460 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 AC115283.1-201ENST00000427353 400 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 MTCO1P54-201ENST00000430139 712 ntBASIC5.03□□□□□ -1.6
EPHA3P29320 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.03□□□□□ -1.6
EPHA3P29320 AL161722.2-201ENST00000434731 981 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms