Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC006499.6-201ENST00000511169 607 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 RNU6-889P-201ENST00000517189 103 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 MIR4697-201ENST00000582977 78 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AL139395.1-201ENST00000603662 160 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC011453.2-201ENST00000603737 729 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PTPN4P29074 AC008966.2-201ENST00000606157 453 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AL359715.4-201ENST00000606629 1436 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC007497.1-201ENST00000610421 561 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AL118556.2-201ENST00000614375 824 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 uc_338.9-201ENST00000617424 182 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AL731566.2-201ENST00000618971 317 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 MIR6853-201ENST00000619642 74 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 AC096656.1-201ENST00000623826 1364 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC011815.3-201ENST00000624194 473 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 OR5AC4P-202ENST00000642086 985 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PTPN4P29074 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PTPN4P29074 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
PTPN4P29074 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN4P29074 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN4P29074 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN4P29074 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTPN4P29074 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTPN4P29074 RNA5SP22-201ENST00000365393 109 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 MIR92A2-201ENST00000385299 75 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 RNA5SP332-201ENST00000391063 115 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN4P29074 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN4P29074 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 RN7SKP167-201ENST00000411047 285 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 TBCAP2-201ENST00000416175 326 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 COX6CP17-201ENST00000421389 185 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AC009965.2-201ENST00000425328 970 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 RPL21P43-201ENST00000425440 472 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 GEMIN8P3-201ENST00000445417 720 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 RPS27AP15-201ENST00000447672 466 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 IFNWP4-201ENST00000453148 294 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 snoU13.1-201ENST00000459157 104 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 AC015795.1-201ENST00000513669 327 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 RN7SKP92-201ENST00000517266 244 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AC093249.4-201ENST00000564755 259 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 RN7SL690P-201ENST00000582087 240 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 MIR5096-201ENST00000583713 70 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 OR1AB1P-201ENST00000585564 761 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 AC098935.2-201ENST00000604222 466 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AC010424.2-201ENST00000607594 443 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 FAM27B-201ENST00000610601 213 ntBASIC4.58□□□□□ -1.68
PTPN4P29074 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN4P29074 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTPN4P29074 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTPN4P29074 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN4P29074 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PTPN4P29074 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN4P29074 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN4P29074 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PTPN4P29074 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PTPN4P29074 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN4P29074 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN4P29074 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPN4P29074 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 SNORA62-201ENST00000365493 153 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN4P29074 OR2B7P-201ENST00000429302 934 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 AC016712.1-201ENST00000431088 378 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN4P29074 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PTPN4P29074 AC239809.1-201ENST00000450470 217 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN4P29074 AC093267.1-201ENST00000489176 961 ntBASIC4.57□□□□□ -1.68
PTPN4P29074 AC005912.1-201ENST00000495392 255 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms