Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 BX276092.8-201ENST00000455722 250 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AL121769.1-201ENST00000469473 401 ntBASIC6.71□□□□□ -1.34
LIG1P18858 RPL7AP10-201ENST00000481016 791 ntBASIC6.71□□□□□ -1.34
LIG1P18858 HMGB1P44-201ENST00000508597 572 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.71□□□□□ -1.34
LIG1P18858 AC097486.1-201ENST00000515331 210 ntBASIC6.71□□□□□ -1.34
LIG1P18858 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.71□□□□□ -1.34
LIG1P18858 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.71□□□□□ -1.34
LIG1P18858 OR8Q1P-201ENST00000526467 655 ntBASIC6.71□□□□□ -1.34
LIG1P18858 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.71□□□□□ -1.34
LIG1P18858 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.71□□□□□ -1.34
LIG1P18858 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.71□□□□□ -1.34
LIG1P18858 FGF7P1-201ENST00000582820 288 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AL513327.3-201ENST00000602618 469 ntBASIC6.71□□□□□ -1.34
LIG1P18858 SNORA11.6-201ENST00000619030 128 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC069209.1-201ENST00000619282 651 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.71□□□□□ -1.34
LIG1P18858 DUXAP9-208ENST00000622815 614 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC004009.2-201ENST00000623016 728 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC073488.3-201ENST00000631611 778 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.71□□□□□ -1.34
LIG1P18858 AC079776.5-201ENST00000641920 211 ntBASIC6.71□□□□□ -1.34
LIG1P18858 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LIG1P18858 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
LIG1P18858 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.71□□□□□ -1.34
LIG1P18858 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 MTCO1P6-201ENST00000481192 1384 ntBASIC6.7□□□□□ -1.34
LIG1P18858 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 AF287957.1-201ENST00000607368 1595 ntBASIC6.7□□□□□ -1.34
LIG1P18858 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 OR9G4-201ENST00000302957 984 ntBASIC6.7□□□□□ -1.34
LIG1P18858 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIG1P18858 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIG1P18858 AC087752.1-201ENST00000391360 558 ntBASIC6.7□□□□□ -1.34
LIG1P18858 AC104297.1-201ENST00000393779 870 ntBASIC6.7□□□□□ -1.34
LIG1P18858 AC013404.1-201ENST00000413068 249 ntBASIC6.7□□□□□ -1.34
LIG1P18858 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.7□□□□□ -1.34
LIG1P18858 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 AC099677.3-201ENST00000427081 395 ntBASIC6.7□□□□□ -1.34
LIG1P18858 VTI1BP4-201ENST00000427516 527 ntBASIC6.7□□□□□ -1.34
LIG1P18858 CRIP1P1-201ENST00000427567 185 ntBASIC6.7□□□□□ -1.34
LIG1P18858 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 HMGB1P31-201ENST00000437242 427 ntBASIC6.7□□□□□ -1.34
LIG1P18858 AL512286.1-201ENST00000439244 400 ntBASIC6.7□□□□□ -1.34
LIG1P18858 RPS7P3-201ENST00000443360 580 ntBASIC6.7□□□□□ -1.34
LIG1P18858 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 VN1R10P-201ENST00000447106 875 ntBASIC6.7□□□□□ -1.34
LIG1P18858 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.7□□□□□ -1.34
LIG1P18858 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.7□□□□□ -1.34
LIG1P18858 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.7□□□□□ -1.34
LIG1P18858 RPS4XP12-201ENST00000461747 709 ntBASIC6.7□□□□□ -1.34
LIG1P18858 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 AC006539.1-201ENST00000481419 501 ntBASIC6.7□□□□□ -1.34
LIG1P18858 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 RPS7P6-201ENST00000485777 579 ntBASIC6.7□□□□□ -1.34
LIG1P18858 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 IGHV3-32-201ENST00000519182 355 ntBASIC6.7□□□□□ -1.34
LIG1P18858 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.7□□□□□ -1.34
LIG1P18858 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 OR4C2P-201ENST00000530855 1064 ntBASIC6.7□□□□□ -1.34
LIG1P18858 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.7□□□□□ -1.34
LIG1P18858 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 AC093775.1-201ENST00000624154 1868 ntBASIC6.7□□□□□ -1.34
LIG1P18858 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.7□□□□□ -1.34
LIG1P18858 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIG1P18858 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.7□□□□□ -1.34
LIG1P18858 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
LIG1P18858 AL079343.1-201ENST00000572358 1771 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms