Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF4P18848 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.63□□□□□ -1.51
ATF4P18848 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
ATF4P18848 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 RBPJP7-201ENST00000442803 1447 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RBPJP5-201ENST00000449433 1447 ntBASIC5.63□□□□□ -1.51
ATF4P18848 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
ATF4P18848 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 ASNSP1-201ENST00000518311 1939 ntBASIC5.62□□□□□ -1.51
ATF4P18848 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 ZNF33CP-201ENST00000432492 2030 ntBASIC5.62□□□□□ -1.51
ATF4P18848 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATF4P18848 MT-TC-201ENST00000387405 66 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AL359694.1-201ENST00000403247 604 ntBASIC5.62□□□□□ -1.51
ATF4P18848 SNORA3.1-201ENST00000408166 111 ntBASIC5.62□□□□□ -1.51
ATF4P18848 MIR1277-201ENST00000408536 78 ntBASIC5.62□□□□□ -1.51
ATF4P18848 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 CYCSP10-201ENST00000417973 294 ntBASIC5.62□□□□□ -1.51
ATF4P18848 RPS17P17-201ENST00000419392 409 ntBASIC5.62□□□□□ -1.51
ATF4P18848 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.62□□□□□ -1.51
ATF4P18848 AP003385.1-201ENST00000426387 893 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC133104.1-201ENST00000429100 218 ntBASIC5.62□□□□□ -1.51
ATF4P18848 DDX11L10-201ENST00000430178 571 ntBASIC5.62□□□□□ -1.51
ATF4P18848 RPL31P35-201ENST00000431058 377 ntBASIC5.62□□□□□ -1.51
ATF4P18848 PUDPP2-201ENST00000431423 643 ntBASIC5.62□□□□□ -1.51
ATF4P18848 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 PHBP4-201ENST00000437447 837 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC112653.1-201ENST00000443851 386 ntBASIC5.62□□□□□ -1.51
ATF4P18848 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC007000.1-201ENST00000453064 794 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC027673.1-201ENST00000456245 405 ntBASIC5.62□□□□□ -1.51
ATF4P18848 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 AC013267.1-201ENST00000458227 267 ntBASIC5.62□□□□□ -1.51
ATF4P18848 RN7SL251P-201ENST00000464175 297 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF4P18848 AC021382.1-201ENST00000483523 359 ntBASIC5.62□□□□□ -1.51
ATF4P18848 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 FCF1P3-201ENST00000496394 590 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC097263.1-201ENST00000496795 606 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF4P18848 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF4P18848 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
ATF4P18848 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 AC100784.1-201ENST00000522790 310 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AP001994.1-201ENST00000527539 826 ntBASIC5.62□□□□□ -1.51
ATF4P18848 FAM92A1P1-201ENST00000528023 890 ntBASIC5.62□□□□□ -1.51
ATF4P18848 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF4P18848 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF4P18848 BMS1P15-201ENST00000554269 1141 ntBASIC5.62□□□□□ -1.51
ATF4P18848 COX6CP11-201ENST00000555293 229 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.62□□□□□ -1.51
ATF4P18848 AC091304.4-201ENST00000565703 620 ntBASIC5.62□□□□□ -1.51
ATF4P18848 RN7SL786P-201ENST00000579130 298 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.62□□□□□ -1.51
ATF4P18848 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.62□□□□□ -1.51
ATF4P18848 SIGLEC31P-201ENST00000594237 551 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 RPS28P1-201ENST00000604589 187 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 AL008729.2-201ENST00000606393 473 ntBASIC5.62□□□□□ -1.51
ATF4P18848 U47924.1-201ENST00000606539 434 ntBASIC5.62□□□□□ -1.51
ATF4P18848 MIR98-201ENST00000606724 119 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC011816.2-201ENST00000607089 556 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AL355073.2-201ENST00000612106 557 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AL121809.2-201ENST00000613169 341 ntBASIC5.62□□□□□ -1.51
ATF4P18848 MLECP1-201ENST00000615893 709 ntBASIC5.62□□□□□ -1.51
ATF4P18848 RNA5SP439-201ENST00000617595 124 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AL732618.1-201ENST00000623251 301 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms