Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.83□□□□□ -1.48
PTPN1P18031 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN1P18031 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTPN1P18031 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN1P18031 AC004076.2-201ENST00000620532 3323 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTPN1P18031 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 DCAF13P3-201ENST00000561147 1334 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 RNU6-621P-201ENST00000364752 109 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 Y_RNA.311-201ENST00000365068 96 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 MIR16-1-201ENST00000385271 89 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 MIR320B1-201ENST00000390209 79 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTPN1P18031 RNU1-77P-201ENST00000390868 162 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 AL009174.1-201ENST00000426577 416 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC093155.1-201ENST00000440164 826 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 IGBP1P3-201ENST00000447449 1000 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 KATNBL1P6-201ENST00000453433 915 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 BX248409.1-201ENST00000455497 255 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AC093899.1-201ENST00000457984 376 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC109458.1-201ENST00000508858 316 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC110775.1-201ENST00000513721 462 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 RNU6-1225P-201ENST00000516336 65 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 CDC42P3-201ENST00000518493 633 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN1P18031 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC116158.1-201ENST00000560231 2129 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC090525.3-201ENST00000605601 189 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AL135786.2-201ENST00000608422 615 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PTPN1P18031 AC100793.4-201ENST00000613683 429 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AC015712.7-201ENST00000615211 635 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AL356274.1-201ENST00000617064 410 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 RNA5SP439-201ENST00000617595 124 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AC091932.2-201ENST00000623014 291 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 AL160394.1-201ENST00000624765 724 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN1P18031 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN1P18031 AP002512.4-202ENST00000641599 4530 ntBASIC5.82□□□□□ -1.48
PTPN1P18031 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN1P18031 AL355488.2-201ENST00000609909 2850 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN1P18031 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN1P18031 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN1P18031 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTPN1P18031 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
PTPN1P18031 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN1P18031 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN1P18031 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN1P18031 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN1P18031 RNA5SP335-201ENST00000363817 110 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN1P18031 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 Y_RNA.604-201ENST00000410574 102 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 TPMTP3-201ENST00000411928 735 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN1P18031 MTND4LP11-201ENST00000422184 280 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 SRSF1P1-201ENST00000424058 520 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 LINC02210-201ENST00000444561 288 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 AL591363.1-201ENST00000450091 483 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 RPL5P32-201ENST00000454085 879 ntBASIC5.81□□□□□ -1.48
PTPN1P18031 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms