Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-1102P-201ENST00000516149 96 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFRAP16234 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 AC090819.1-201ENST00000523800 1111 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFRAP16234 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFRAP16234 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFRAP16234 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFRAP16234 DYNLL1P4-201ENST00000549314 266 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.84□□□□□ -1.63
PDGFRAP16234 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.84□□□□□ -1.63
PDGFRAP16234 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFRAP16234 AC068790.7-201ENST00000602347 528 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFRAP16234 MIR7973-1-201ENST00000614683 76 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFRAP16234 AL445493.3-201ENST00000619568 477 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 AP000346.3-201ENST00000622821 210 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 AC010435.1-201ENST00000623353 1177 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 U3.53-201ENST00000628922 216 ntBASIC4.84□□□□□ -1.63
PDGFRAP16234 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFRAP16234 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFRAP16234 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.64
PDGFRAP16234 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDGFRAP16234 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
PDGFRAP16234 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDGFRAP16234 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFRAP16234 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 AC108467.2-201ENST00000617640 1597 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFRAP16234 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDGFRAP16234 AC096656.1-201ENST00000623826 1364 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDGFRAP16234 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDGFRAP16234 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFRAP16234 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFRAP16234 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFRAP16234 SNORA56-201ENST00000383966 129 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 RNU6-146P-201ENST00000384602 108 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 RN7SKP216-201ENST00000411050 312 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFRAP16234 Z74021.1-201ENST00000423610 407 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFRAP16234 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC092013.1-201ENST00000438795 332 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 YWHAZP2-201ENST00000440317 728 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC011753.3-201ENST00000443436 406 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AL935212.3-201ENST00000450729 284 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 CEACAMP6-201ENST00000452007 574 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 ISCUP1-201ENST00000454451 448 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 NDUFA12P1-201ENST00000455914 406 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 SCARNA10-201ENST00000459255 330 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 AC093720.1-201ENST00000505681 714 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 RNA5SP360-201ENST00000516555 118 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 CIR1P1-201ENST00000524055 1133 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFRAP16234 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFRAP16234 AC092474.3-201ENST00000603022 568 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 PSMA6P4-201ENST00000603247 718 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC055764.2-201ENST00000610089 670 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC139769.3-201ENST00000618383 175 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AC097372.4-201ENST00000625025 466 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PDGFRAP16234 ZNF137P-201ENST00000456718 1920 ntBASIC4.83□□□□□ -1.64
PDGFRAP16234 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFRAP16234 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFRAP16234 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC108751.5-201ENST00000492880 1336 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFRAP16234 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFRAP16234 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDGFRAP16234 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDGFRAP16234 Y_RNA.110-201ENST00000363220 99 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 RNU6-650P-201ENST00000365658 111 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 ATP5F1P2-201ENST00000398143 760 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 MIR921-201ENST00000401133 56 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 AC013404.1-201ENST00000413068 249 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 MTCO3P4-201ENST00000419236 787 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms