Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CFTRP13569 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CFTRP13569 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.87□□□□□ -1.31
CFTRP13569 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.87□□□□□ -1.31
CFTRP13569 RNU2-65P-201ENST00000410162 185 ntBASIC6.87□□□□□ -1.31
CFTRP13569 AL161631.1-201ENST00000417933 486 ntBASIC6.87□□□□□ -1.31
CFTRP13569 AL590609.2-201ENST00000421430 368 ntBASIC6.87□□□□□ -1.31
CFTRP13569 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.87□□□□□ -1.31
CFTRP13569 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.87□□□□□ -1.31
CFTRP13569 RPS27AP15-201ENST00000447672 466 ntBASIC6.87□□□□□ -1.31
CFTRP13569 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.87□□□□□ -1.31
CFTRP13569 AC005726.1-201ENST00000494679 427 ntBASIC6.87□□□□□ -1.31
CFTRP13569 CDH12P2-201ENST00000504393 298 ntBASIC6.87□□□□□ -1.31
CFTRP13569 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.87□□□□□ -1.31
CFTRP13569 AC063950.1-201ENST00000552036 308 ntBASIC6.87□□□□□ -1.31
CFTRP13569 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.87□□□□□ -1.31
CFTRP13569 AC124068.1-201ENST00000563131 678 ntBASIC6.87□□□□□ -1.31
CFTRP13569 RNU1-30P-201ENST00000606575 163 ntBASIC6.87□□□□□ -1.31
CFTRP13569 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
CFTRP13569 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CFTRP13569 VDAC1P9-201ENST00000412766 841 ntBASIC6.86□□□□□ -1.31
CFTRP13569 AC093815.1-201ENST00000508637 280 ntBASIC6.86□□□□□ -1.31
CFTRP13569 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.86□□□□□ -1.31
CFTRP13569 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.86□□□□□ -1.31
CFTRP13569 AP005264.7-201ENST00000625003 745 ntBASIC6.86□□□□□ -1.31
CFTRP13569 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CFTRP13569 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CFTRP13569 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CFTRP13569 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.86□□□□□ -1.31
CFTRP13569 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CFTRP13569 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CFTRP13569 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.86□□□□□ -1.31
CFTRP13569 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.86□□□□□ -1.31
CFTRP13569 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 HSPD1P21-201ENST00000436541 245 ntBASIC6.85□□□□□ -1.31
CFTRP13569 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.85□□□□□ -1.31
CFTRP13569 AC025627.2-201ENST00000576220 160 ntBASIC6.85□□□□□ -1.31
CFTRP13569 MTCO1P12-201ENST00000414273 1543 ntBASIC6.85□□□□□ -1.31
CFTRP13569 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.85□□□□□ -1.31
CFTRP13569 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CFTRP13569 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CFTRP13569 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.85□□□□□ -1.31
CFTRP13569 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.85□□□□□ -1.31
CFTRP13569 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.85□□□□□ -1.31
CFTRP13569 HSPD1P15-201ENST00000505573 1122 ntBASIC6.85□□□□□ -1.31
CFTRP13569 AC106782.4-201ENST00000568264 210 ntBASIC6.85□□□□□ -1.31
CFTRP13569 AC064801.1-201ENST00000612025 407 ntBASIC6.85□□□□□ -1.31
CFTRP13569 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CFTRP13569 MAPK10-320ENST00000641462 6696 ntBASIC6.85□□□□□ -1.31
CFTRP13569 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CFTRP13569 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.84□□□□□ -1.31
CFTRP13569 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
CFTRP13569 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CFTRP13569 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC6.84□□□□□ -1.31
CFTRP13569 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CFTRP13569 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.84□□□□□ -1.31
CFTRP13569 AL356274.2-201ENST00000624379 3752 ntBASIC6.84□□□□□ -1.31
CFTRP13569 Y_RNA.111-201ENST00000363248 100 ntBASIC6.84□□□□□ -1.31
CFTRP13569 RN7SKP177-201ENST00000410567 355 ntBASIC6.84□□□□□ -1.31
CFTRP13569 ATP5A1P2-201ENST00000412323 255 ntBASIC6.84□□□□□ -1.31
CFTRP13569 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.84□□□□□ -1.31
CFTRP13569 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.84□□□□□ -1.31
CFTRP13569 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.84□□□□□ -1.31
CFTRP13569 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CFTRP13569 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.84□□□□□ -1.31
CFTRP13569 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CFTRP13569 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CFTRP13569 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CFTRP13569 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CFTRP13569 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.83□□□□□ -1.32
CFTRP13569 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.83□□□□□ -1.32
CFTRP13569 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CFTRP13569 RNA5SP51-201ENST00000364750 119 ntBASIC6.83□□□□□ -1.32
CFTRP13569 RNA5SP267-201ENST00000364893 126 ntBASIC6.83□□□□□ -1.32
CFTRP13569 OR52E6-202ENST00000379946 954 ntBASIC6.83□□□□□ -1.32
CFTRP13569 RPS7P15-201ENST00000415804 584 ntBASIC6.83□□□□□ -1.32
CFTRP13569 Z74696.2-201ENST00000436514 498 ntBASIC6.83□□□□□ -1.32
CFTRP13569 RPL23AP65-201ENST00000475608 468 ntBASIC6.83□□□□□ -1.32
CFTRP13569 AC108022.1-201ENST00000493466 478 ntBASIC6.83□□□□□ -1.32
CFTRP13569 AC016550.3-201ENST00000515706 767 ntBASIC6.83□□□□□ -1.32
CFTRP13569 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.83□□□□□ -1.32
CFTRP13569 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.83□□□□□ -1.32
CFTRP13569 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.83□□□□□ -1.32
CFTRP13569 AC055839.1-201ENST00000634467 498 ntBASIC6.83□□□□□ -1.32
CFTRP13569 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
CFTRP13569 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CFTRP13569 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.83□□□□□ -1.32
CFTRP13569 ZNF402P-201ENST00000404435 3100 ntBASIC6.83□□□□□ -1.32
CFTRP13569 AP002512.4-202ENST00000641599 4530 ntBASIC6.83□□□□□ -1.32
CFTRP13569 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CFTRP13569 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CFTRP13569 MIR199A2-201ENST00000385289 110 ntBASIC6.82□□□□□ -1.32
CFTRP13569 SNORA3.3-201ENST00000408712 125 ntBASIC6.82□□□□□ -1.32
CFTRP13569 FABP3P2-201ENST00000453169 399 ntBASIC6.82□□□□□ -1.32
CFTRP13569 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms