Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
KRT3P12035 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
KRT3P12035 AC079741.1-201ENST00000321498 212 ntBASIC4.7□□□□□ -1.66
KRT3P12035 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 RNU1-44P-201ENST00000384453 163 ntBASIC4.7□□□□□ -1.66
KRT3P12035 Z86062.1-201ENST00000406773 777 ntBASIC4.7□□□□□ -1.66
KRT3P12035 UQCRBP1-201ENST00000421129 336 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AC004448.2-201ENST00000422360 586 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AL158073.1-201ENST00000426848 1104 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT3P12035 RPL12P46-201ENST00000436610 195 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT3P12035 MTCYBP12-201ENST00000440559 1134 ntBASIC4.7□□□□□ -1.66
KRT3P12035 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT3P12035 AL513321.1-201ENST00000441175 761 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AC006326.1-201ENST00000445465 787 ntBASIC4.7□□□□□ -1.66
KRT3P12035 VN1R32P-201ENST00000452234 905 ntBASIC4.7□□□□□ -1.66
KRT3P12035 DDX39BP2-208ENST00000453923 258 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AC092905.1-201ENST00000467527 949 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT3P12035 AC108729.2-201ENST00000476543 840 ntBASIC4.7□□□□□ -1.66
KRT3P12035 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.7□□□□□ -1.66
KRT3P12035 PGBD4P4-201ENST00000509673 613 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT3P12035 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT3P12035 RNA5SP497-201ENST00000516081 97 ntBASIC4.7□□□□□ -1.66
KRT3P12035 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.7□□□□□ -1.66
KRT3P12035 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.7□□□□□ -1.66
KRT3P12035 AP000827.1-201ENST00000527814 258 ntBASIC4.7□□□□□ -1.66
KRT3P12035 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.7□□□□□ -1.66
KRT3P12035 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT3P12035 AC010201.1-201ENST00000605051 540 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AC034236.3-201ENST00000605999 461 ntBASIC4.7□□□□□ -1.66
KRT3P12035 AL353726.1-201ENST00000614041 1000 ntBASIC4.7□□□□□ -1.66
KRT3P12035 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT3P12035 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.7□□□□□ -1.66
KRT3P12035 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT3P12035 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KRT3P12035 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT3P12035 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KRT3P12035 DHX40P1-201ENST00000588725 1412 ntBASIC4.7□□□□□ -1.66
KRT3P12035 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT3P12035 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT3P12035 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KRT3P12035 AC006971.1-201ENST00000407916 4486 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC090017.1-201ENST00000548612 1779 ntBASIC4.69□□□□□ -1.66
KRT3P12035 RNVU1-6-201ENST00000364688 164 ntBASIC4.69□□□□□ -1.66
KRT3P12035 SNORD51.1-201ENST00000365405 77 ntBASIC4.69□□□□□ -1.66
KRT3P12035 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
KRT3P12035 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
KRT3P12035 RNA5SP372-201ENST00000390836 115 ntBASIC4.69□□□□□ -1.66
KRT3P12035 ATP5F1P2-201ENST00000398143 760 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AL078604.1-201ENST00000404609 466 ntBASIC4.69□□□□□ -1.66
KRT3P12035 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.69□□□□□ -1.66
KRT3P12035 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC019050.1-201ENST00000418508 492 ntBASIC4.69□□□□□ -1.66
KRT3P12035 OR6K4P-201ENST00000423179 955 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AL390879.2-203ENST00000426943 1121 ntBASIC4.69□□□□□ -1.66
KRT3P12035 RPL17P35-201ENST00000432217 549 ntBASIC4.69□□□□□ -1.66
KRT3P12035 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.69□□□□□ -1.66
KRT3P12035 AC007000.2-201ENST00000442564 487 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT3P12035 AL157827.1-201ENST00000447622 132 ntBASIC4.69□□□□□ -1.66
KRT3P12035 RPS27AP15-201ENST00000447672 466 ntBASIC4.69□□□□□ -1.66
KRT3P12035 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT3P12035 AC005008.1-201ENST00000456151 612 ntBASIC4.69□□□□□ -1.66
KRT3P12035 MTND2P30-201ENST00000456663 382 ntBASIC4.69□□□□□ -1.66
KRT3P12035 RPS27AP17-201ENST00000463344 455 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT3P12035 AC021146.3-201ENST00000511911 260 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.69□□□□□ -1.66
KRT3P12035 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT3P12035 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.69□□□□□ -1.66
KRT3P12035 AC090515.3-201ENST00000560431 315 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC023158.1-201ENST00000561632 1025 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC008759.1-201ENST00000589783 983 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC020634.1-201ENST00000608701 549 ntBASIC4.69□□□□□ -1.66
KRT3P12035 uc_338.18-201ENST00000615451 175 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC009237.17-201ENST00000618111 748 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC006065.6-201ENST00000625201 545 ntBASIC4.69□□□□□ -1.66
KRT3P12035 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT3P12035 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
KRT3P12035 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT3P12035 AC091046.3-201ENST00000631455 1574 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC087190.4-201ENST00000574616 8334 ntBASIC4.69□□□□□ -1.66
KRT3P12035 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT3P12035 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRT3P12035 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT3P12035 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT3P12035 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT3P12035 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
KRT3P12035 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms