Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAB40ALP0C0E4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAB40ALP0C0E4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RAB40ALP0C0E4 AC006042.3-201ENST00000454684 1469 ntBASIC4.56□□□□□ -1.68
RAB40ALP0C0E4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAB40ALP0C0E4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAB40ALP0C0E4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL357515.1-201ENST00000402967 542 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 MIR1303-201ENST00000408625 86 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 RSU1P3-201ENST00000412878 835 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC013262.1-201ENST00000426710 252 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 PPIAP13-201ENST00000434706 478 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 RPL7P33-201ENST00000444159 742 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 TPTE2P6-202ENST00000445572 1007 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 RPL21P18-201ENST00000469899 480 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC073358.1-201ENST00000505671 684 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC087894.1-201ENST00000538359 518 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ATP5F1P7-201ENST00000567330 760 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC126365.2-201ENST00000580630 379 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC010200.2-201ENST00000605098 235 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL121932.1-201ENST00000605542 214 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AL139022.2-201ENST00000606934 443 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC096586.1-201ENST00000610267 561 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 MIR378J-201ENST00000611988 109 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 STMN1P1-201ENST00000617809 440 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC012414.7-202ENST00000622705 1090 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC024595.1-201ENST00000623088 387 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 U6.107-201ENST00000637108 79 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 AC090017.1-201ENST00000548612 1779 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40ALP0C0E4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 SEC63P2-201ENST00000503863 1939 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 AC026951.1-201ENST00000559530 2459 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 MTND4P9-201ENST00000507819 1346 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 MIR620-201ENST00000385232 95 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 RPL23AP59-201ENST00000399415 461 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 GLULP6-201ENST00000399502 913 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 AC013429.2-201ENST00000418798 781 ntBASIC4.54□□□□□ -1.68
RAB40ALP0C0E4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms