Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 METTL21EP-201ENST00000298105 713 ntBASIC5.07□□□□□ -1.6
RB1P06400 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 RN7SKP224-201ENST00000364140 325 ntBASIC5.07□□□□□ -1.6
RB1P06400 SNORA62.2-201ENST00000364672 152 ntBASIC5.07□□□□□ -1.6
RB1P06400 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 BX664727.1-201ENST00000416024 466 ntBASIC5.07□□□□□ -1.6
RB1P06400 AC048351.1-201ENST00000420064 602 ntBASIC5.07□□□□□ -1.6
RB1P06400 AL358176.3-201ENST00000420757 454 ntBASIC5.07□□□□□ -1.6
RB1P06400 AL590609.2-201ENST00000421430 368 ntBASIC5.07□□□□□ -1.6
RB1P06400 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 MTCO1P43-201ENST00000431831 488 ntBASIC5.07□□□□□ -1.6
RB1P06400 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.07□□□□□ -1.6
RB1P06400 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 AC243772.1-201ENST00000451620 410 ntBASIC5.07□□□□□ -1.6
RB1P06400 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 RPL23AP24-201ENST00000458203 385 ntBASIC5.07□□□□□ -1.6
RB1P06400 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 AC084824.1-201ENST00000550917 1005 ntBASIC5.07□□□□□ -1.6
RB1P06400 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 AC116553.2-201ENST00000564203 463 ntBASIC5.07□□□□□ -1.6
RB1P06400 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.07□□□□□ -1.6
RB1P06400 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 AL133338.2-201ENST00000604292 736 ntBASIC5.07□□□□□ -1.6
RB1P06400 AL133243.1-201ENST00000614487 366 ntBASIC5.07□□□□□ -1.6
RB1P06400 AC018926.1-201ENST00000616335 435 ntBASIC5.07□□□□□ -1.6
RB1P06400 BNIP3P41-202ENST00000616656 861 ntBASIC5.07□□□□□ -1.6
RB1P06400 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.07□□□□□ -1.6
RB1P06400 AC068880.4-201ENST00000623082 495 ntBASIC5.07□□□□□ -1.6
RB1P06400 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RB1P06400 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RB1P06400 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RB1P06400 GTF2H2B-203ENST00000508065 1432 ntBASIC5.06□□□□□ -1.6
RB1P06400 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.06□□□□□ -1.6
RB1P06400 MFSD8-213ENST00000641134 1327 ntBASIC5.06□□□□□ -1.6
RB1P06400 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.06□□□□□ -1.6
RB1P06400 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 SNORA71.2-201ENST00000364941 134 ntBASIC5.06□□□□□ -1.6
RB1P06400 RNU6-1176P-201ENST00000390955 107 ntBASIC5.06□□□□□ -1.6
RB1P06400 AL035405.1-201ENST00000400795 710 ntBASIC5.06□□□□□ -1.6
RB1P06400 AL512430.2-201ENST00000406786 339 ntBASIC5.06□□□□□ -1.6
RB1P06400 OR13Z1P-201ENST00000416141 834 ntBASIC5.06□□□□□ -1.6
RB1P06400 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 AC023128.2-201ENST00000420880 1223 ntBASIC5.06□□□□□ -1.6
RB1P06400 AL356387.2-201ENST00000422272 243 ntBASIC5.06□□□□□ -1.6
RB1P06400 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.06□□□□□ -1.6
RB1P06400 AL451139.1-201ENST00000434718 346 ntBASIC5.06□□□□□ -1.6
RB1P06400 CDC27P1-201ENST00000445384 715 ntBASIC5.06□□□□□ -1.6
RB1P06400 RPL6P5-201ENST00000445678 828 ntBASIC5.06□□□□□ -1.6
RB1P06400 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.06□□□□□ -1.6
RB1P06400 AC008379.1-201ENST00000463655 464 ntBASIC5.06□□□□□ -1.6
RB1P06400 AP000942.1-201ENST00000463969 747 ntBASIC5.06□□□□□ -1.6
RB1P06400 RPL21P6-201ENST00000479171 504 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.06□□□□□ -1.6
RB1P06400 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 OR5H3P-201ENST00000502817 919 ntBASIC5.06□□□□□ -1.6
RB1P06400 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.06□□□□□ -1.6
RB1P06400 AC007016.1-201ENST00000512110 244 ntBASIC5.06□□□□□ -1.6
RB1P06400 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.06□□□□□ -1.6
RB1P06400 AP003102.1-201ENST00000525638 661 ntBASIC5.06□□□□□ -1.6
RB1P06400 AP000916.1-201ENST00000533869 835 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC068339.2-201ENST00000534395 618 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.06□□□□□ -1.6
RB1P06400 AC104072.1-201ENST00000568817 668 ntBASIC5.06□□□□□ -1.6
RB1P06400 MIR3138-201ENST00000585238 82 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC092953.2-201ENST00000608000 699 ntBASIC5.06□□□□□ -1.6
RB1P06400 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.06□□□□□ -1.6
RB1P06400 AC023043.4-201ENST00000612081 449 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC024941.1-201ENST00000612250 334 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.06□□□□□ -1.6
RB1P06400 RMST_10.1-201ENST00000616309 154 ntBASIC5.06□□□□□ -1.6
RB1P06400 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.06□□□□□ -1.6
RB1P06400 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.06□□□□□ -1.6
RB1P06400 AC008079.2-201ENST00000623543 20396 ntBASIC5.06□□□□□ -1.6
RB1P06400 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms