Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 SNORD56.4-201ENST00000363883 71 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 SNORD116-4-201ENST00000384733 96 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DOAP06340 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC092638.1-201ENST00000411966 1275 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 COX5BP7-201ENST00000414780 274 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 PNRC2P1-201ENST00000423940 420 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC068135.1-201ENST00000446164 246 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC073387.1-201ENST00000453261 709 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 Z95152.1-201ENST00000453556 656 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 RPL6P9-201ENST00000466502 859 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 RN7SL354P-201ENST00000469282 294 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC104971.1-201ENST00000495117 578 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DOAP06340 OR8I1P-201ENST00000529291 931 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 LRRC6P1-201ENST00000532188 885 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 SNORA74C-1-201ENST00000580726 201 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 MTCO2P22-201ENST00000603246 681 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL035411.2-201ENST00000604022 421 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL121932.1-201ENST00000605542 214 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL022401.1-201ENST00000619498 108 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AP000542.2-201ENST00000623199 6179 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC010928.1-201ENST00000592477 1447 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AL590240.1-201ENST00000334118 313 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 RPS3AP23-201ENST00000401762 784 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AL138880.1-201ENST00000405824 642 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 BTF3L4P1-201ENST00000413813 468 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 HMGB1P49-201ENST00000418882 569 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC069213.2-201ENST00000420238 366 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 PTP4A1P5-201ENST00000420305 455 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC006065.1-201ENST00000422539 802 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 DNAJC19P7-201ENST00000428811 344 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC092162.1-201ENST00000432828 434 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC084290.1-201ENST00000434995 374 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 MUPP-201ENST00000438111 566 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AL096803.2-201ENST00000450032 677 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 CYCSP42-201ENST00000450823 238 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 RN7SL517P-201ENST00000462240 305 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 RN7SL481P-201ENST00000477764 299 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 RFPL4AP3-201ENST00000515267 345 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AP000926.4-201ENST00000527351 454 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 MTND2P26-201ENST00000528255 1029 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AP003717.3-201ENST00000544832 1180 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC087897.1-201ENST00000550134 156 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC040958.1-201ENST00000561102 201 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 RN7SL690P-201ENST00000582087 240 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 ELOCP28-201ENST00000590044 317 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC008745.1-201ENST00000604064 271 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC018638.7-201ENST00000605836 1114 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AL121895.2-201ENST00000619558 447 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms