Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.71□□□□□ -1.82
CD74P04233 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.71□□□□□ -1.82
CD74P04233 MIR4512-201ENST00000583257 77 ntBASIC3.71□□□□□ -1.82
CD74P04233 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.71□□□□□ -1.82
CD74P04233 AC006116.3-201ENST00000592968 361 ntBASIC3.71□□□□□ -1.82
CD74P04233 AC025946.2-201ENST00000603398 234 ntBASIC3.71□□□□□ -1.82
CD74P04233 AC117490.2-201ENST00000610042 594 ntBASIC3.71□□□□□ -1.82
CD74P04233 EIF3FP1-201ENST00000613970 806 ntBASIC3.71□□□□□ -1.82
CD74P04233 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD74P04233 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.71□□□□□ -1.82
CD74P04233 AP002799.1-201ENST00000623552 423 ntBASIC3.71□□□□□ -1.82
CD74P04233 AC112694.2-201ENST00000623697 768 ntBASIC3.71□□□□□ -1.82
CD74P04233 AC027287.1-201ENST00000553115 1453 ntBASIC3.71□□□□□ -1.82
CD74P04233 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD74P04233 AL136964.1-201ENST00000622038 2990 ntBASIC3.71□□□□□ -1.82
CD74P04233 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.71□□□□□ -1.82
CD74P04233 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD74P04233 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD74P04233 AL627171.1-201ENST00000618845 1308 ntBASIC3.7□□□□□ -1.82
CD74P04233 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CD74P04233 ZNF137P-201ENST00000456718 1920 ntBASIC3.7□□□□□ -1.82
CD74P04233 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CD74P04233 SNORD66.1-201ENST00000391230 76 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.7□□□□□ -1.82
CD74P04233 AL138785.1-201ENST00000425821 331 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC234779.1-201ENST00000425910 285 ntBASIC3.7□□□□□ -1.82
CD74P04233 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.7□□□□□ -1.82
CD74P04233 NRBF2P3-201ENST00000432731 865 ntBASIC3.7□□□□□ -1.82
CD74P04233 AL049745.1-201ENST00000433953 286 ntBASIC3.7□□□□□ -1.82
CD74P04233 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 UBE2V1P3-201ENST00000439651 417 ntBASIC3.7□□□□□ -1.82
CD74P04233 RPL23AP43-201ENST00000446445 471 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.7□□□□□ -1.82
CD74P04233 RPL7P31-201ENST00000450192 724 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC108145.1-201ENST00000503770 153 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.7□□□□□ -1.82
CD74P04233 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.7□□□□□ -1.82
CD74P04233 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.7□□□□□ -1.82
CD74P04233 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.7□□□□□ -1.82
CD74P04233 EIF1AXP2-201ENST00000555940 413 ntBASIC3.7□□□□□ -1.82
CD74P04233 AL049874.4-201ENST00000557593 255 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.7□□□□□ -1.82
CD74P04233 MIR4646-201ENST00000580775 63 ntBASIC3.7□□□□□ -1.82
CD74P04233 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC020914.4-201ENST00000597690 277 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC010680.3-201ENST00000604215 520 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC024940.4-201ENST00000605507 246 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC116651.1-201ENST00000609724 556 ntBASIC3.7□□□□□ -1.82
CD74P04233 AC078899.5-201ENST00000612475 178 ntBASIC3.7□□□□□ -1.82
CD74P04233 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.7□□□□□ -1.82
CD74P04233 AC108467.2-201ENST00000617640 1597 ntBASIC3.7□□□□□ -1.82
CD74P04233 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.7□□□□□ -1.82
CD74P04233 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CD74P04233 AC093311.1-201ENST00000506586 2021 ntBASIC3.7□□□□□ -1.82
CD74P04233 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CD74P04233 AC083899.2-201ENST00000423285 1376 ntBASIC3.69□□□□□ -1.82
CD74P04233 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 AC021146.4-201ENST00000309229 279 ntBASIC3.69□□□□□ -1.82
CD74P04233 RNU6-386P-201ENST00000362650 107 ntBASIC3.69□□□□□ -1.82
CD74P04233 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
CD74P04233 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 MT-TP-201ENST00000387461 68 ntBASIC3.69□□□□□ -1.82
CD74P04233 MIR550A3-201ENST00000390735 95 ntBASIC3.69□□□□□ -1.82
CD74P04233 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CD74P04233 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.69□□□□□ -1.82
CD74P04233 RPL7P4-203ENST00000430239 730 ntBASIC3.69□□□□□ -1.82
CD74P04233 FTH1P6-201ENST00000430768 320 ntBASIC3.69□□□□□ -1.82
CD74P04233 HMGB3P21-201ENST00000452483 547 ntBASIC3.69□□□□□ -1.82
CD74P04233 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.69□□□□□ -1.82
CD74P04233 RPL7AP52-201ENST00000458096 790 ntBASIC3.69□□□□□ -1.82
CD74P04233 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.69□□□□□ -1.82
CD74P04233 RN7SKP147-201ENST00000517154 244 ntBASIC3.69□□□□□ -1.82
CD74P04233 AC013701.1-201ENST00000522657 465 ntBASIC3.69□□□□□ -1.82
CD74P04233 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.69□□□□□ -1.82
CD74P04233 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.69□□□□□ -1.82
CD74P04233 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.69□□□□□ -1.82
CD74P04233 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.69□□□□□ -1.82
CD74P04233 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.69□□□□□ -1.82
CD74P04233 AL049539.1-201ENST00000611964 459 ntBASIC3.69□□□□□ -1.82
CD74P04233 MIR6891-201ENST00000618788 93 ntBASIC3.69□□□□□ -1.82
CD74P04233 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.69□□□□□ -1.82
CD74P04233 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CD74P04233 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 AC007529.1-201ENST00000418574 2178 ntBASIC3.69□□□□□ -1.82
CD74P04233 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 FAM35DP-201ENST00000323387 2712 ntBASIC3.69□□□□□ -1.82
CD74P04233 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD74P04233 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.69□□□□□ -1.82
CD74P04233 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms