Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRNA1P02708 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA1P02708 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AL354984.3-201ENST00000604803 325 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AC007620.3-201ENST00000608131 497 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA1P02708 MIR8069-1-201ENST00000616627 86 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 MIR8069-2-201ENST00000621412 86 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA1P02708 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 AC107068.1-201ENST00000563286 4218 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA1P02708 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA1P02708 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA1P02708 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA1P02708 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA1P02708 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA1P02708 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 SPRR2C-201ENST00000290702 219 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 MIR372-201ENST00000362225 67 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 RNU6-1251P-201ENST00000364502 107 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 AC093719.1-202ENST00000392735 373 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA1P02708 MFSD13B-201ENST00000420133 1290 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 RFESDP1-201ENST00000422350 461 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA1P02708 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AP000936.3-201ENST00000438127 255 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 ARL5AP3-201ENST00000439327 386 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 CCRL1P1-201ENST00000449542 1053 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 EIF4A1P11-201ENST00000451239 222 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AC112206.1-201ENST00000468416 477 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 MTND3P6-201ENST00000485242 339 ntBASIC4.79□□□□□ -1.64
CHRNA1P02708 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA1P02708 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA1P02708 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA1P02708 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA1P02708 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA1P02708 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CHRNA1P02708 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA1P02708 RNU4-7P-201ENST00000364758 141 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 RNA5SP151-201ENST00000365632 117 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 AC097374.1-203ENST00000400783 485 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AL136131.1-201ENST00000406079 803 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AL035696.2-201ENST00000407941 709 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 RPS20P14-201ENST00000412545 360 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 RPL6P29-201ENST00000414863 865 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA1P02708 AL356095.1-201ENST00000417217 199 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 RPL36AP36-201ENST00000418616 301 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 MTCYBP7-201ENST00000419540 1134 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA1P02708 Z74021.1-201ENST00000423610 407 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AL157831.1-201ENST00000426134 473 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 RPL21P91-201ENST00000429231 479 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 BTF3P10-201ENST00000433415 495 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AL132765.1-201ENST00000434165 553 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA1P02708 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA1P02708 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CHRNA1P02708 RPS27AP13-201ENST00000498403 237 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 HAUS1P1-201ENST00000505275 832 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 RNU6-551P-201ENST00000516661 103 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA1P02708 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA1P02708 AC022784.5-201ENST00000522241 437 ntBASIC4.78□□□□□ -1.64
CHRNA1P02708 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA1P02708 TVP23BP1-201ENST00000557500 617 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms