Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL3A1P02461 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL3A1P02461 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL3A1P02461 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
COL3A1P02461 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL3A1P02461 U3.23-201ENST00000391132 200 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL3A1P02461 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.77□□□□□ -1.49
COL3A1P02461 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.77□□□□□ -1.49
COL3A1P02461 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.77□□□□□ -1.49
COL3A1P02461 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.77□□□□□ -1.49
COL3A1P02461 MTCO2P21-201ENST00000419780 677 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 MTCO3P30-201ENST00000426425 670 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 PPIAP13-201ENST00000434706 478 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.77□□□□□ -1.49
COL3A1P02461 RPL35AP15-201ENST00000468042 339 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 RPL7P19-201ENST00000469948 618 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 RN7SL41P-201ENST00000476144 297 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AC108145.1-201ENST00000503770 153 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC091435.1-201ENST00000505442 584 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.77□□□□□ -1.49
COL3A1P02461 RNA5SP49-201ENST00000516450 115 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.77□□□□□ -1.49
COL3A1P02461 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC113192.3-201ENST00000529152 742 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AP001804.2-201ENST00000533932 910 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AL109766.1-201ENST00000555080 552 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AC106785.3-201ENST00000564064 847 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AC079148.1-201ENST00000565944 819 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL3A1P02461 AGGF1P5-201ENST00000567900 919 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 MIR1254-2-201ENST00000579553 63 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 MTATP6P2-201ENST00000603319 678 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 FAM27D1-201ENST00000612308 341 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AC084824.4-201ENST00000620106 731 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.77□□□□□ -1.49
COL3A1P02461 AC099654.8-201ENST00000637757 681 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 AC119674.1-220ENST00000641502 1048 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 EOGT-210ENST00000615922 1931 ntBASIC5.77□□□□□ -1.49
COL3A1P02461 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL3A1P02461 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
COL3A1P02461 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL3A1P02461 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.76□□□□□ -1.49
COL3A1P02461 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
COL3A1P02461 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
COL3A1P02461 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.76□□□□□ -1.49
COL3A1P02461 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL3A1P02461 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL3A1P02461 AL078604.1-201ENST00000404609 466 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.76□□□□□ -1.49
COL3A1P02461 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.76□□□□□ -1.49
COL3A1P02461 MIR1911-201ENST00000410783 80 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 RN7SKP33-201ENST00000410942 340 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 MTCO2P23-201ENST00000425216 680 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 RPP40P1-201ENST00000426762 456 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.76□□□□□ -1.49
COL3A1P02461 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.76□□□□□ -1.49
COL3A1P02461 PPIAP21-201ENST00000464473 501 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.76□□□□□ -1.49
COL3A1P02461 RPS27AP13-201ENST00000498403 237 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.76□□□□□ -1.49
COL3A1P02461 ATP1B1P1-201ENST00000509767 915 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AP003730.1-201ENST00000524605 285 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.76□□□□□ -1.49
COL3A1P02461 MIR3160-1-201ENST00000577972 85 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 RN7SL600P-201ENST00000581811 299 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AC010857.1-201ENST00000606398 594 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AC025175.1-201ENST00000606482 759 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AC097505.1-201ENST00000610199 565 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AC006338.2-201ENST00000616864 791 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AL355493.4-201ENST00000618530 292 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AL023881.1-201ENST00000621088 301 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 AP001642.1-201ENST00000624727 2117 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 MIR3653-201ENST00000625572 110 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.76□□□□□ -1.49
COL3A1P02461 MTND4P5-201ENST00000435821 1374 ntBASIC5.76□□□□□ -1.49
COL3A1P02461 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL3A1P02461 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.75□□□□□ -1.49
COL3A1P02461 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL3A1P02461 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL3A1P02461 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL3A1P02461 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL3A1P02461 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL3A1P02461 RNA5SP28-201ENST00000363841 119 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms