Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KCTD9P3-201ENST00000434597 1169 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC092809.1-201ENST00000441469 474 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 ARL2BPP10-201ENST00000446487 531 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC239809.1-201ENST00000450470 217 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RPL7P32-201ENST00000457119 744 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU6-599P-201ENST00000459383 107 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU6-1193P-201ENST00000459461 107 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RPS3AP41-201ENST00000462701 778 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RN7SL93P-201ENST00000463035 293 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC093824.1-201ENST00000508796 343 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 KRT19P6-201ENST00000510983 209 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RNA5SP519-201ENST00000516480 119 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC105233.3-201ENST00000531125 744 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC099489.2-201ENST00000574976 260 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC005084.1-201ENST00000605160 304 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU6-368P-201ENST00000620928 107 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU6-538P-201ENST00000622329 107 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSSCA1O60232 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.28□□□□□ -1.88
SSSCA1O60232 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SSSCA1O60232 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.27□□□□□ -1.89
SSSCA1O60232 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.27□□□□□ -1.89
SSSCA1O60232 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 RNU6-1279P-201ENST00000383917 103 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 SNORA70F-201ENST00000384142 135 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 RNU6-729P-201ENST00000384399 107 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 NCSTNP1-201ENST00000406229 144 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SSSCA1O60232 RNU4-34P-201ENST00000410431 124 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 RPL6P29-201ENST00000414863 865 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.27□□□□□ -1.89
SSSCA1O60232 BTG3P1-201ENST00000435859 716 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 PPIAP17-201ENST00000438507 471 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.27□□□□□ -1.89
SSSCA1O60232 RPL36AP15-201ENST00000444514 266 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 RPS3AP53-201ENST00000454716 778 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 DNAJC19P1-201ENST00000455312 319 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AC010326.1-201ENST00000462726 602 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AC092324.1-201ENST00000468671 324 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AC106872.2-201ENST00000494303 480 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.27□□□□□ -1.89
SSSCA1O60232 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.27□□□□□ -1.89
SSSCA1O60232 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.27□□□□□ -1.89
SSSCA1O60232 AP001804.2-201ENST00000533932 910 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AC090515.3-201ENST00000560431 315 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AL133457.1-201ENST00000564251 987 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AC084783.1-201ENST00000565846 910 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 RN7SL690P-201ENST00000582087 240 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 AC115286.1-201ENST00000604298 434 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.27□□□□□ -1.89
SSSCA1O60232 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.27□□□□□ -1.89
SSSCA1O60232 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
SSSCA1O60232 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSSCA1O60232 MFSD8-216ENST00000641147 4009 ntBASIC3.27□□□□□ -1.89
SSSCA1O60232 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.27□□□□□ -1.89
SSSCA1O60232 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSSCA1O60232 ATP5F1P4-201ENST00000397288 746 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.26□□□□□ -1.89
SSSCA1O60232 NRBF2P2-201ENST00000413087 861 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 P2RY10P2-201ENST00000416730 913 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AC009302.1-201ENST00000417147 390 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.26□□□□□ -1.89
SSSCA1O60232 CYP4F29P-201ENST00000420685 446 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.26□□□□□ -1.89
SSSCA1O60232 RWDD4P2-201ENST00000426392 563 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 DPY19L1P2-201ENST00000426647 915 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AC104837.2-201ENST00000427236 424 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.26□□□□□ -1.89
SSSCA1O60232 AL365396.1-201ENST00000430854 671 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.26□□□□□ -1.89
SSSCA1O60232 AC013410.1-201ENST00000436223 1232 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 SNRPFP2-201ENST00000440710 251 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms