Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 YWHABP2-201ENST00000540201 713 ntBASIC4.5□□□□□ -1.69
SSX4O60224 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.5□□□□□ -1.69
SSX4O60224 AC006518.2-201ENST00000542513 940 ntBASIC4.5□□□□□ -1.69
SSX4O60224 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX4O60224 AC023824.3-201ENST00000569003 562 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 AL022067.1-201ENST00000602426 454 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC104785.1-201ENST00000603220 588 ntBASIC4.5□□□□□ -1.69
SSX4O60224 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 AC009597.2-201ENST00000604659 592 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC018695.5-201ENST00000605872 315 ntBASIC4.5□□□□□ -1.69
SSX4O60224 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 AP002967.1-201ENST00000624203 539 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC139713.2-210ENST00000641741 992 ntBASIC4.5□□□□□ -1.69
SSX4O60224 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 AC104446.1-201ENST00000613728 1321 ntBASIC4.49□□□□□ -1.69
SSX4O60224 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSX4O60224 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 RNU5E-10P-201ENST00000363506 118 ntBASIC4.49□□□□□ -1.69
SSX4O60224 RNU6-1339P-201ENST00000363574 91 ntBASIC4.49□□□□□ -1.69
SSX4O60224 SNORA72.3-201ENST00000365074 132 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AL109941.1-201ENST00000401925 229 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AL035079.1-201ENST00000405210 287 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AL512430.2-201ENST00000406786 339 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX4O60224 AC009302.1-201ENST00000417147 390 ntBASIC4.49□□□□□ -1.69
SSX4O60224 DYNLL1P7-201ENST00000429273 258 ntBASIC4.49□□□□□ -1.69
SSX4O60224 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX4O60224 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.49□□□□□ -1.69
SSX4O60224 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX4O60224 RPS26P30-201ENST00000443431 335 ntBASIC4.49□□□□□ -1.69
SSX4O60224 RHEBP2-201ENST00000450289 600 ntBASIC4.49□□□□□ -1.69
SSX4O60224 TPMTP4-201ENST00000450749 678 ntBASIC4.49□□□□□ -1.69
SSX4O60224 DNAJC19P8-201ENST00000452887 259 ntBASIC4.49□□□□□ -1.69
SSX4O60224 HIGD1AP8-201ENST00000453927 274 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC104164.3-201ENST00000467363 1258 ntBASIC4.49□□□□□ -1.69
SSX4O60224 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.49□□□□□ -1.69
SSX4O60224 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX4O60224 AC010285.3-201ENST00000511668 676 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX4O60224 RNU6-276P-201ENST00000516114 96 ntBASIC4.49□□□□□ -1.69
SSX4O60224 RNA5SP228-201ENST00000516232 133 ntBASIC4.49□□□□□ -1.69
SSX4O60224 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX4O60224 AC134698.5-201ENST00000519444 336 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC022360.1-201ENST00000521058 340 ntBASIC4.49□□□□□ -1.69
SSX4O60224 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC021451.1-201ENST00000523498 1129 ntBASIC4.49□□□□□ -1.69
SSX4O60224 HIGD1AP5-201ENST00000529959 259 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 ZNF971P-201ENST00000562068 1249 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC090751.1-201ENST00000566966 267 ntBASIC4.49□□□□□ -1.69
SSX4O60224 MIR4480-201ENST00000582492 71 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.49□□□□□ -1.69
SSX4O60224 AC133552.5-201ENST00000604266 540 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC005252.1-201ENST00000604518 1063 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC013468.1-201ENST00000608680 598 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC090912.3-201ENST00000609775 533 ntBASIC4.49□□□□□ -1.69
SSX4O60224 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.49□□□□□ -1.69
SSX4O60224 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 AL590396.4-201ENST00000636779 956 ntBASIC4.49□□□□□ -1.69
SSX4O60224 OR2L1P-202ENST00000641567 1023 ntBASIC4.49□□□□□ -1.69
SSX4O60224 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSX4O60224 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX4O60224 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 AP000756.2-201ENST00000624168 2567 ntBASIC4.49□□□□□ -1.69
SSX4O60224 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX4O60224 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSX4O60224 AC006210.2-201ENST00000367074 1545 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 OR51H2P-202ENST00000641424 3046 ntBASIC4.48□□□□□ -1.69
SSX4O60224 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SSX4O60224 IL6STP1-201ENST00000346911 1020 ntBASIC4.48□□□□□ -1.69
SSX4O60224 RN7SKP153-201ENST00000365026 316 ntBASIC4.48□□□□□ -1.69
SSX4O60224 MCTS2P-201ENST00000394552 546 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AL592291.1-201ENST00000403830 352 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms