Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL513478.4-201ENST00000641636 310 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.5□□□□□ -1.85
SDCBPO00560 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 AL158163.1-201ENST00000603915 1649 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 FAM3C2-201ENST00000312214 681 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SDCBPO00560 PGBD4P8-201ENST00000412993 562 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 RPL6P29-201ENST00000414863 865 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 OR51A6P-201ENST00000418680 1004 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AL391219.1-201ENST00000422570 483 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AL157831.1-201ENST00000426134 473 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.49□□□□□ -1.85
SDCBPO00560 RPS3AP54-201ENST00000435535 734 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 VN1R25P-201ENST00000443385 738 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.49□□□□□ -1.85
SDCBPO00560 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.49□□□□□ -1.85
SDCBPO00560 EEF1A1P1-201ENST00000447052 739 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 NPM1P39-201ENST00000449818 867 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC133473.1-201ENST00000455173 299 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 VN1R40P-201ENST00000455196 941 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC096741.1-201ENST00000472250 846 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 RPS29P22-201ENST00000472363 168 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC013356.1-201ENST00000489027 564 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC069499.1-201ENST00000489433 509 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 RPL31P61-201ENST00000496160 376 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDCBPO00560 AL592156.1-201ENST00000508758 304 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC010476.1-201ENST00000519111 851 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 NPM1P6-201ENST00000521088 871 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC090281.1-201ENST00000523019 276 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.49□□□□□ -1.85
SDCBPO00560 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.49□□□□□ -1.85
SDCBPO00560 TVP23BP1-201ENST00000557500 617 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 MIR4675-201ENST00000577898 77 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC234771.5-201ENST00000600161 514 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC005191.1-201ENST00000603950 358 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC067838.1-201ENST00000606064 577 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AC128687.2-201ENST00000609657 566 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AP000255.1-201ENST00000610276 676 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDCBPO00560 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC015722.2-201ENST00000622210 551 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AL445363.3-201ENST00000623080 671 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 AL359715.5-201ENST00000623431 443 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 AL139254.3-201ENST00000641097 674 ntBASIC3.49□□□□□ -1.85
SDCBPO00560 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.49□□□□□ -1.85
SDCBPO00560 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SDCBPO00560 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SDCBPO00560 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDCBPO00560 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SDCBPO00560 MFSD8-216ENST00000641147 4009 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.48□□□□□ -1.85
SDCBPO00560 AC092162.3-201ENST00000624511 1624 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 RNU1-14P-201ENST00000362759 152 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SDCBPO00560 RPL23AP48-201ENST00000406913 488 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 AL035696.2-201ENST00000407941 709 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 AC011933.1-201ENST00000413334 321 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 IPMKP1-201ENST00000425988 855 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 AC087650.1-201ENST00000431445 468 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 SERPINA7P1-201ENST00000443077 631 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.48□□□□□ -1.85
SDCBPO00560 AC116533.1-201ENST00000459748 321 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 RN7SL738P-201ENST00000470264 297 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 RPL35P6-201ENST00000490024 372 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 PGBD4P4-201ENST00000509673 613 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 RNA5SP519-201ENST00000516480 119 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 RNA5SP73-201ENST00000516744 108 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.48□□□□□ -1.85
SDCBPO00560 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.48□□□□□ -1.85
SDCBPO00560 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.48□□□□□ -1.85
SDCBPO00560 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.48□□□□□ -1.85
SDCBPO00560 AC090246.1-201ENST00000616499 426 ntBASIC3.48□□□□□ -1.85
SDCBPO00560 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.48□□□□□ -1.85
SDCBPO00560 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.48□□□□□ -1.85
SDCBPO00560 AP000346.3-201ENST00000622821 210 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms