Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.43□□□□□ -1.54
FOXN3O00409 ELOCP35-201ENST00000604289 336 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC021749.1-201ENST00000604322 607 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC099676.1-201ENST00000608886 657 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AP005137.2-201ENST00000609238 400 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC022467.1-201ENST00000614738 749 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC021755.4-201ENST00000616620 456 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC018926.3-201ENST00000618841 406 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AP002791.1-201ENST00000623291 381 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC099494.2-201ENST00000623371 978 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC087821.2-201ENST00000637086 450 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FOXN3O00409 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 ZNF876P-202ENST00000398732 1485 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 AL138820.1-201ENST00000617901 5305 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.43□□□□□ -1.54
FOXN3O00409 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
FOXN3O00409 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 AC011447.7-201ENST00000624228 1590 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 SFR1P1-201ENST00000403720 688 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 RN7SKP278-201ENST00000410504 342 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 RNU6-575P-201ENST00000411326 105 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC211486.3-201ENST00000412694 621 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 RPL6P29-201ENST00000414863 865 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 VPS26BP1-201ENST00000417155 755 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 AC013429.2-201ENST00000418798 781 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 MTCO2P21-201ENST00000419780 677 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.42□□□□□ -1.54
FOXN3O00409 AL009174.1-201ENST00000426577 416 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 AURKAPS1-201ENST00000451805 1212 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 MRPL42P4-201ENST00000453267 443 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AL389915.2-201ENST00000454576 441 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 AC018638.3-201ENST00000461273 132 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 COPS8P2-201ENST00000473228 627 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC011037.1-201ENST00000483964 558 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.42□□□□□ -1.54
FOXN3O00409 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 AC105031.1-201ENST00000518550 476 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
FOXN3O00409 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 AL442163.2-201ENST00000553912 710 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 MTND4LP24-201ENST00000572277 291 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 MIR4489-201ENST00000578869 62 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 RN7SL753P-201ENST00000581238 290 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC061975.8-201ENST00000587058 721 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 AC016877.3-201ENST00000606778 504 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC007349.4-201ENST00000608114 532 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AL592148.2-201ENST00000612210 372 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC243654.2-201ENST00000612843 443 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
FOXN3O00409 AF001550.2-201ENST00000636643 217 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
FOXN3O00409 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
FOXN3O00409 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
FOXN3O00409 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXN3O00409 AC104260.2-201ENST00000623551 3497 ntBASIC5.42□□□□□ -1.54
FOXN3O00409 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXN3O00409 PABPC1P6-201ENST00000445594 1829 ntBASIC5.41□□□□□ -1.54
FOXN3O00409 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXN3O00409 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
FOXN3O00409 AC046144.1-201ENST00000478559 1853 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms