Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 OR52B1P-201ENST00000316506 909 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC067945.1-201ENST00000342609 618 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 SNORA48.7-201ENST00000391302 135 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 NPM1P26-201ENST00000426339 738 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 SKP1P3-201ENST00000429280 487 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 FTH1P16-201ENST00000435241 552 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 HLA-N-201ENST00000437516 135 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 MTCO3P17-201ENST00000443775 513 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPS27AP15-201ENST00000447672 466 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 VN1R32P-201ENST00000452234 905 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 DHFRP3-201ENST00000455595 559 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 UBA52P3-201ENST00000491303 382 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPL21P129-201ENST00000491732 478 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPS27AP16-201ENST00000492222 470 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC026402.1-201ENST00000513642 170 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC008694.2-201ENST00000517591 306 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC023762.1-201ENST00000603280 584 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC079587.1-201ENST00000603846 277 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC020634.1-201ENST00000608701 549 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 CASC19-255ENST00000641733 1385 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC245100.2-201ENST00000454544 1679 ntBASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL355852.1-201ENST00000454081 1771 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 SCN1A-220ENST00000641603 12506 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 OR56B2P-201ENST00000317102 954 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNU1-130P-201ENST00000363930 160 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNU1-132P-201ENST00000364300 164 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 MT-RNR1-201ENST00000389680 954 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 PTP4A1P1-201ENST00000420539 515 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPL23AP25-201ENST00000430973 463 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 MTND6P18-201ENST00000439477 513 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL359073.1-201ENST00000448036 403 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 NPM1P39-201ENST00000449818 867 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC090013.1-201ENST00000485147 480 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPL35P6-201ENST00000490024 372 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 PDCD5P1-201ENST00000543528 309 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AGGF1P6-201ENST00000569213 976 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPL7P50-201ENST00000600588 727 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC015849.6-201ENST00000605454 474 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC092111.2-201ENST00000611627 1414 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP003499.2-201ENST00000624100 483 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC112484.5-201ENST00000624189 228 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TMX2-CTNND1H3BSU7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms