Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC017007.4-201ENST00000503353 1352 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC010928.1-201ENST00000592477 1447 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 MAPK10-349ENST00000641767 3661 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC139713.2-215ENST00000641428 5037 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC104118.1-201ENST00000607625 1589 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL445437.1-201ENST00000623157 3087 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 OR4K17-201ENST00000315543 1032 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL590240.1-201ENST00000334118 313 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 SNORD56.4-201ENST00000363883 71 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RNU1-32P-201ENST00000363937 159 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 U3.30-201ENST00000391308 210 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RN7SKP106-201ENST00000410832 272 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC009480.2-201ENST00000422916 432 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RPS26P47-201ENST00000427219 348 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 ETF1P3-201ENST00000430422 1160 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RPS24P8-201ENST00000431490 402 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 PPIAP13-201ENST00000434706 478 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC006994.1-201ENST00000438212 839 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC092013.1-201ENST00000438795 332 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 TPTE2P6-202ENST00000445572 1007 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC000111.2-201ENST00000448200 210 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 MTND2P39-201ENST00000457230 764 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC008379.1-201ENST00000463655 464 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 NDUFA5P9-201ENST00000472609 340 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RPL12P20-201ENST00000475538 479 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 NAMPTP2-201ENST00000505629 1115 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RNA5SP249-201ENST00000516127 99 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 HMGB1P19-201ENST00000517578 577 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AL049839.1-201ENST00000556151 657 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC022726.1-201ENST00000587475 207 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC068790.4-201ENST00000602474 263 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC010424.2-201ENST00000607594 443 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC112503.2-201ENST00000609005 552 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 U6.48-201ENST00000618523 106 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 MIR6810-201ENST00000622701 70 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AP000943.4-201ENST00000622912 357 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC116563.2-201ENST00000624751 535 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC093535.2-201ENST00000624769 2326 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC008758.3-201ENST00000507003 1829 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 AC009643.2-201ENST00000603543 1448 ntBASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA3F8WFD2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RNA5SP27-201ENST00000363839 119 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RNA5SP332-201ENST00000391063 115 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 AL512430.2-201ENST00000406786 339 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 MIR1303-201ENST00000408625 86 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RNU6-603P-201ENST00000411403 107 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RSU1P3-201ENST00000412878 835 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 HMGB3P31-201ENST00000413333 595 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 HMGN1P5-201ENST00000448591 263 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 RPS5P7-201ENST00000456664 608 ntBASIC4.35□□□□□ -1.71
NPIPA3F8WFD2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms