Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 Z82217.1-201ENST00000625157 8149 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 RNA5SP513-201ENST00000364648 118 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 GCNT6-201ENST00000379591 934 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 SNORA68.2-201ENST00000391263 128 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 DHFRP5-201ENST00000406944 564 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 RN7SKP235-201ENST00000410662 305 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 NRBF2P2-201ENST00000413087 861 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AL356387.2-201ENST00000422272 243 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 RPS12P5-201ENST00000423449 371 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC011742.1-201ENST00000431448 434 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 PHBP16-201ENST00000446318 950 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 RPL31P61-201ENST00000496160 376 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 MTND2P31-201ENST00000512602 616 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 MTND2P17-201ENST00000550281 688 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC079171.1-201ENST00000568788 914 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AC128687.2-201ENST00000609657 566 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AP005264.7-201ENST00000625003 745 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AL773545.4-201ENST00000637262 310 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 AL513478.4-201ENST00000641636 310 ntBASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM49D1C9J1S8 AC025031.4-201ENST00000621248 3271 ntBASIC4.15□□□□□ -1.74
TRIM49D1C9J1S8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM49D1C9J1S8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM49D1C9J1S8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM49D1C9J1S8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM49D1C9J1S8 OR10J6P-201ENST00000289731 930 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 FAM3C2-201ENST00000312214 681 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 RNU1-14P-201ENST00000362759 152 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC083799.1-201ENST00000366451 910 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC019070.1-201ENST00000415008 1024 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 TRGV7-201ENST00000427089 353 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC011998.1-201ENST00000433403 117 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 CCDC75P1-201ENST00000469247 791 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 CDH12P4-201ENST00000517835 295 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 CDH12P3-201ENST00000517935 295 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 CDH12P1-201ENST00000518435 295 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 OR8G5-201ENST00000524943 1041 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC104662.1-201ENST00000604448 511 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 BNIP3P7-201ENST00000605641 516 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AL159169.2-201ENST00000610061 1269 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC067931.1-201ENST00000624190 671 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC073342.3-201ENST00000624211 193 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 AC107027.3-201ENST00000565095 3473 ntBASIC4.15□□□□□ -1.75
TRIM49D1C9J1S8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 RPL37P18-201ENST00000411602 243 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC013470.3-201ENST00000420252 1194 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 USP9YP9-201ENST00000429406 715 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 VN1R25P-201ENST00000443385 738 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 VN1R40P-201ENST00000455196 941 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 RN7SL98P-201ENST00000462271 300 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 RPL23AP71-201ENST00000470966 469 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC109327.1-201ENST00000471666 403 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AL592156.1-201ENST00000508758 304 ntBASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM49D1C9J1S8 VWA8P1-201ENST00000510889 176 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms