Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TBC1D3FA6NER0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC005261.4-201ENST00000600047 1385 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 RNU4-92P-201ENST00000363783 136 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 RNU6-317P-201ENST00000384031 107 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 RNA5SP241-201ENST00000391326 114 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 RNU6-77P-201ENST00000410554 91 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC079809.1-201ENST00000415468 276 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 MOB1AP1-201ENST00000430903 535 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC009238.2-201ENST00000431026 355 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 BX323845.1-201ENST00000432417 179 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 TCEA1P1-201ENST00000449716 880 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 RPL23AP44-201ENST00000482216 473 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 BOLA3P3-201ENST00000505182 232 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC098976.1-201ENST00000513014 541 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AL671862.1-201ENST00000515851 349 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 BGLT3-201ENST00000564523 994 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC025588.2-201ENST00000604851 466 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AP001521.2-201ENST00000608772 546 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC092106.3-201ENST00000611308 722 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AL158163.2-201ENST00000619110 700 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC006042.3-201ENST00000454684 1469 ntBASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.04□□□□□ -1.6
TBC1D3FA6NER0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 SNORA11C-201ENST00000408532 129 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AF186996.5-201ENST00000418098 904 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 MTCO2P20-201ENST00000437339 673 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 MTCYBP31-201ENST00000438855 1122 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 CEACAMP9-201ENST00000442990 513 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC090804.1-201ENST00000448870 490 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 GAPDHP14-201ENST00000450472 937 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 OR52J1P-201ENST00000450596 932 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 BX842559.2-201ENST00000451418 605 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC005229.2-201ENST00000456995 399 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC063943.1-201ENST00000465434 453 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 RPL23AP12-201ENST00000467573 473 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AL161747.1-201ENST00000480068 358 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC069528.1-202ENST00000482888 637 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 AC073522.1-201ENST00000483312 377 ntBASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.03□□□□□ -1.6
TBC1D3FA6NER0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms