Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 Z98745.1-201ENST00000402553 494 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RPS16P5-201ENST00000406501 404 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SKP216-201ENST00000411050 312 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC119751.6-201ENST00000416712 186 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC245028.1-201ENST00000423259 256 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 Z74021.1-201ENST00000423610 407 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AL158073.1-201ENST00000426848 1104 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 CEACAMP9-201ENST00000442990 513 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AL935212.3-201ENST00000450729 284 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 ISCUP1-201ENST00000454451 448 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC010326.1-201ENST00000462726 602 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL738P-201ENST00000470264 297 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC108729.2-201ENST00000476543 840 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL205P-201ENST00000490174 284 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RPS4XP18-201ENST00000495480 763 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 MTND4LP2-201ENST00000502312 285 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC004923.2-201ENST00000529649 369 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL690P-201ENST00000582087 240 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL52P-201ENST00000584271 284 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 VN1R84P-201ENST00000593697 235 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC234771.5-201ENST00000600161 514 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL722P-201ENST00000617780 284 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RN7SL565P-201ENST00000618246 284 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC004232.3-201ENST00000622977 525 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC104118.1-201ENST00000607625 1589 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 DDX18P3-201ENST00000404856 2007 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC021146.4-201ENST00000309229 279 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RNA5SP443-201ENST00000363083 132 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RNA5SP505-201ENST00000364748 108 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RNU6-452P-201ENST00000384406 107 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 HMGB1P10-201ENST00000395823 563 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RPS4XP9-201ENST00000405151 780 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AL353692.2-201ENST00000407054 335 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RN7SKP106-201ENST00000410832 272 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RNU2-72P-201ENST00000411175 163 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 CYCSP10-201ENST00000417973 294 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AL590609.2-201ENST00000421430 368 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AL513321.1-201ENST00000441175 761 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC011753.3-201ENST00000443436 406 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 MTND2P30-201ENST00000456663 382 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RPL23AP72-201ENST00000492447 435 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC113430.1-201ENST00000506872 718 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 RN7SKP141-201ENST00000516167 338 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 OR5AN2P-201ENST00000534535 896 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC123768.4-201ENST00000616244 701 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC090617.9-201ENST00000623751 147 ntBASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4BQ9Y4P1 AC108467.2-201ENST00000617640 1597 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms