Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC012616.1-201ENST00000600294 197 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC009027.1-201ENST00000604510 479 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC017037.3-201ENST00000625016 472 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 OR55B1P-203ENST00000641518 2602 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AC104446.1-201ENST00000613728 1321 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 AL022322.2-201ENST00000624072 20397 ntBASIC5.11□□□□□ -1.59
VPS4AQ9UN37 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS4AQ9UN37 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RNU4-44P-201ENST00000363050 141 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RNU6-1214P-201ENST00000363650 109 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RNU6-98P-201ENST00000384173 107 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 SNORA16A-201ENST00000384342 137 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 DBIP1-201ENST00000401435 260 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RN7SKP222-201ENST00000410651 315 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AL390774.1-201ENST00000411924 246 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 HIGD1AP12-201ENST00000427832 281 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RPL7P29-201ENST00000437151 728 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 CEACAMP9-201ENST00000442990 513 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC068135.1-201ENST00000446164 246 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC233982.1-201ENST00000451247 436 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RN7SL346P-201ENST00000491561 294 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC016559.2-201ENST00000510759 359 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 SCARNA16.4-201ENST00000516956 187 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC022360.1-201ENST00000521058 340 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC124293.1-201ENST00000530034 493 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AP002812.4-201ENST00000532139 286 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 YWHABP2-201ENST00000540201 713 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC025574.1-201ENST00000554784 1653 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 MTCYBP13-201ENST00000578634 1093 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 RN7SL356P-201ENST00000582228 248 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 ZNF92P3-201ENST00000596594 954 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AL139344.1-201ENST00000605228 195 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AL445423.1-201ENST00000609941 536 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC091304.6-201ENST00000619761 202 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC083843.3-201ENST00000623679 2186 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 AC074101.1-201ENST00000637861 241 ntBASIC5.1□□□□□ -1.59
VPS4AQ9UN37 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
VPS4AQ9UN37 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 MTND4P10-201ENST00000446199 1363 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 MTCO1P6-201ENST00000481192 1384 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC104623.2-202ENST00000623477 4002 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 OR9G4-201ENST00000302957 984 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 RNU1-146P-201ENST00000364015 165 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 560.3 ms