Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC139495.1-202ENST00000513164 354 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 RNA5SP230-201ENST00000517039 122 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 MTCYBP19-201ENST00000517463 1124 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC068020.1-201ENST00000594215 661 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC005520.3-201ENST00000602874 370 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 AC015908.5-201ENST00000623289 343 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 OR5AC4P-202ENST00000642086 985 ntBASIC8.45□□□□□ -1.06
SHROOM4Q9ULL8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 MTND4P21-201ENST00000453886 1357 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AC110792.3-201ENST00000595906 1614 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 MIR331-201ENST00000362302 94 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 Y_RNA.333-201ENST00000365274 102 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 DPPA2P2-201ENST00000418220 897 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AC009506.2-201ENST00000420635 840 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 COL6A4P2-205ENST00000509855 506 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AL356121.2-201ENST00000624715 780 ntBASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC8.44□□□□□ -1.06
SHROOM4Q9ULL8 AL672167.1-204ENST00000641875 3017 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 MIR483-201ENST00000385070 76 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 CCNB2P1-201ENST00000399411 1150 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 AC093716.1-201ENST00000435923 377 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 MTND2P21-201ENST00000436242 1042 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 EIF4A2P2-201ENST00000455776 1070 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 EIF2S2P5-201ENST00000457635 968 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 RPL5P13-201ENST00000462840 709 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 RPS27AP17-201ENST00000463344 455 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 SNORA74D-201ENST00000516404 141 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 AC069200.1-201ENST00000609511 323 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 LINC01808-202ENST00000641680 1116 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 VPS35P1-201ENST00000563400 1518 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 AL355852.1-201ENST00000454081 1771 ntBASIC8.43□□□□□ -1.06
SHROOM4Q9ULL8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 RPL21P65-201ENST00000406094 466 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 REREP1Y-201ENST00000422655 198 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 GCA-203ENST00000429691 824 ntTSL 3 BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 REREP2Y-201ENST00000439103 200 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 MTCO3P43-201ENST00000440974 771 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 AL353898.1-201ENST00000444055 238 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 RPS15AP29-201ENST00000445539 400 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 AC020890.1-201ENST00000491837 504 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 MTND2P31-201ENST00000512602 616 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 NPM1P41-201ENST00000512920 831 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 AGGF1P6-201ENST00000569213 976 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 AC135803.1-201ENST00000608748 565 ntBASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHROOM4Q9ULL8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 MT-TP-201ENST00000387461 68 ntBASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 RPL5P19-201ENST00000404228 893 ntBASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 CREM-238ENST00000488741 651 ntTSL 2 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms