Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 RAB9AP5-201ENST00000437794 597 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 ELOCP8-201ENST00000439309 332 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AL357520.1-201ENST00000441557 453 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 ELOCP15-201ENST00000442090 332 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 RAB9AP2-201ENST00000443911 597 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC099063.2-201ENST00000446360 662 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC013356.1-201ENST00000489027 564 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 RN7SL205P-201ENST00000490174 284 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC008958.1-201ENST00000511047 682 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 HMGB3P26-201ENST00000560051 582 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC090312.1-201ENST00000580637 348 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC096586.2-201ENST00000610260 441 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 RN7SL722P-201ENST00000617780 284 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 RN7SL565P-201ENST00000618246 284 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AP005264.7-201ENST00000625003 745 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 BMS1P21-201ENST00000634565 365 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AL139254.3-201ENST00000641097 674 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 ASNSP1-201ENST00000518311 1939 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS29Q9UBQ0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC139713.2-214ENST00000642059 1811 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS29Q9UBQ0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS29Q9UBQ0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC011155.1-201ENST00000316512 456 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 SNORD74.4-201ENST00000364129 80 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 OR13C3-201ENST00000374781 1108 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 LAP3P1-201ENST00000403648 294 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AL035696.2-201ENST00000407941 709 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AP000357.1-201ENST00000409926 1165 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC098592.2-201ENST00000413158 265 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC011933.1-201ENST00000413334 321 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 RPS3AP54-201ENST00000435535 734 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 FGF7P3-201ENST00000454645 303 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC116533.1-201ENST00000459748 321 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC025554.1-201ENST00000505641 188 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 AL356218.2-201ENST00000605264 187 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC004241.3-201ENST00000611728 517 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AP000346.3-201ENST00000622821 210 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 AC073342.3-201ENST00000624211 193 ntBASIC4□□□□□ -1.77
VPS29Q9UBQ0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS29Q9UBQ0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS29Q9UBQ0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 OR4K17-201ENST00000315543 1032 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 RNU1-132P-201ENST00000364300 164 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 SNORA37-201ENST00000384504 129 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 AC093719.1-202ENST00000392735 373 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 FHP1-201ENST00000442741 703 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 AL035551.1-201ENST00000446931 348 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 AC009963.2-201ENST00000453431 138 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 RPL36AP13-201ENST00000457490 317 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 AC010469.1-201ENST00000463864 576 ntBASIC3.99□□□□□ -1.77
VPS29Q9UBQ0 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms