Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 MAPK10-303ENST00000641324 3959 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AL161631.1-201ENST00000417933 486 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 EIF4BP1-201ENST00000554881 351 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AC006960.3-201ENST00000561845 705 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AC244258.1-201ENST00000637553 1071 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 DNM1P47-203ENST00000571780 12667 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AJ239321.1-201ENST00000424255 564 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AL391497.1-201ENST00000608671 547 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AL513548.1-201ENST00000562904 1724 ntBASIC4.12□□□□□ -1.75
CHD7Q9P2D1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD7Q9P2D1 AL133268.1-201ENST00000405676 1401 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 SNORD66.1-201ENST00000391230 76 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 ZNF602P-201ENST00000405929 924 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 RNA5SP120-201ENST00000410900 112 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC022695.1-201ENST00000522089 237 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC243654.2-201ENST00000612843 443 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AL139095.1-201ENST00000404326 391 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 VN1R51P-201ENST00000411675 945 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 MTCO1P45-201ENST00000431457 267 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC073387.1-201ENST00000453261 709 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC012158.1-204ENST00000483430 465 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 RPS4XP18-201ENST00000495480 763 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 RNU7-143P-201ENST00000516781 65 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC025627.2-201ENST00000576220 160 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC027216.1-201ENST00000577726 685 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 MIR4672-201ENST00000583126 81 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC090246.1-201ENST00000616499 426 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 RNA5SP439-201ENST00000617595 124 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
CHD7Q9P2D1 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 LINC01109-201ENST00000603837 3081 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 Z97055.1-201ENST00000419730 712 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms