Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RPL29P14-201ENST00000495837 428 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 SCARNA14-201ENST00000516903 136 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 MIR6868-201ENST00000611215 58 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AL391261.4-201ENST00000616012 481 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC005858.4-201ENST00000623191 700 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC021242.1-201ENST00000507315 2035 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 MIR183-201ENST00000384958 110 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 SKP1P3-201ENST00000429280 487 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC008759.1-201ENST00000589783 983 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 AC005255.1-201ENST00000593748 216 ntBASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PHRF1Q9P1Y6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AC004448.2-201ENST00000422360 586 ntBASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AC018635.1-201ENST00000468292 1030 ntBASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 MIR3936-201ENST00000584304 110 ntBASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 OR2BH1P-201ENST00000608850 864 ntBASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 AC015922.4-201ENST00000612568 690 ntBASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PHRF1Q9P1Y6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
PHRF1Q9P1Y6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 SNORA60-201ENST00000362396 134 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 HMGB3P19-201ENST00000403971 560 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 AC007967.1-201ENST00000455422 1159 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 OR9M1P-201ENST00000459641 921 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 AC008155.2-201ENST00000464337 397 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 RN7SL323P-201ENST00000494712 295 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 RNU6-513P-201ENST00000516104 104 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 AC107016.1-201ENST00000550463 337 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 U6.105-201ENST00000637379 88 ntBASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
PHRF1Q9P1Y6 PTMAP5-201ENST00000393073 333 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 ATP5F1P4-201ENST00000397288 746 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 RPL21P17-201ENST00000397467 475 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AL139247.1-201ENST00000422768 325 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AC087369.1-201ENST00000520775 996 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 MIR432-201ENST00000606207 94 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AC019278.1-201ENST00000623516 479 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AF001550.2-201ENST00000636643 217 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 TRIM60P17-201ENST00000415181 719 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms