Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 SETP1-201ENST00000556014 845 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AC145350.1-201ENST00000567426 208 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 PRPF19P1-201ENST00000584766 898 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AC096553.1-201ENST00000605169 829 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AP000894.4-201ENST00000610185 483 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AP001005.3-201ENST00000622049 129 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 AC114947.2-201ENST00000565748 2125 ntBASIC5.09□□□□□ -1.59
NECTIN3Q9NQS3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NECTIN3Q9NQS3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
NECTIN3Q9NQS3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NECTIN3Q9NQS3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NECTIN3Q9NQS3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NECTIN3Q9NQS3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-619P-201ENST00000365146 108 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 EI24P3-201ENST00000399046 1062 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 MTND4P13-201ENST00000402078 1023 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 OR4K12P-201ENST00000406538 961 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 BMS1P13-201ENST00000417301 885 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL133325.1-201ENST00000421090 382 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RPS26P47-201ENST00000427219 348 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RPL37P1-201ENST00000432310 284 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RPL34P6-201ENST00000432390 345 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC090804.1-201ENST00000448870 490 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL672138.1-201ENST00000450604 1015 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 PPIAP21-201ENST00000464473 501 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RPS4XP1-201ENST00000482189 787 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 MTATP6P15-201ENST00000527233 835 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC027369.5-201ENST00000533838 755 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC069545.1-201ENST00000605671 358 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AP003392.5-201ENST00000607857 415 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC097478.2-201ENST00000610572 514 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 MIR6826-201ENST00000617808 98 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 uc_338.7-201ENST00000621834 124 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC135068.5-201ENST00000624197 983 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 AC079416.3-201ENST00000624479 549 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 MTND2P41-201ENST00000637599 773 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 CASC19-264ENST00000641912 1184 ntBASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NECTIN3Q9NQS3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN3Q9NQS3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN3Q9NQS3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NECTIN3Q9NQS3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms