Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 AL160281.1-201ENST00000605307 311 ntBASIC6.29□□□□□ -1.4
SCAPERQ9BY12 COX6CP4-201ENST00000605798 228 ntBASIC6.29□□□□□ -1.4
SCAPERQ9BY12 AL391261.4-201ENST00000616012 481 ntBASIC6.29□□□□□ -1.4
SCAPERQ9BY12 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCAPERQ9BY12 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AL031584.1-201ENST00000447169 754 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 PTMAP3-201ENST00000447474 330 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 DUXAP2-201ENST00000519198 589 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC087499.8-201ENST00000578406 226 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AP005262.1-201ENST00000582646 997 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 HMGB2P1-201ENST00000591146 634 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC008966.2-201ENST00000606157 453 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC015967.1-201ENST00000619893 476 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC032011.1-201ENST00000611703 1549 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC112198.2-201ENST00000426589 6996 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 AC097461.1-201ENST00000568928 2821 ntBASIC6.28□□□□□ -1.4
SCAPERQ9BY12 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.28□□□□□ -1.4
SCAPERQ9BY12 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 PTMAP5-201ENST00000393073 333 ntBASIC6.27□□□□□ -1.41
SCAPERQ9BY12 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AC006011.1-201ENST00000442758 349 ntBASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 OR9M1P-201ENST00000459641 921 ntBASIC6.27□□□□□ -1.41
SCAPERQ9BY12 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AC068870.3-201ENST00000625077 2536 ntBASIC6.27□□□□□ -1.41
SCAPERQ9BY12 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCAPERQ9BY12 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 AC233289.1-201ENST00000403700 508 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 MIR1911-201ENST00000410783 80 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 SNORA57.3-201ENST00000411095 141 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 KRR1P1-201ENST00000419430 803 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 AL353748.1-201ENST00000440753 474 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 RPS20P21-201ENST00000466859 343 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 RNU1-95P-201ENST00000516357 160 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 RNU1-128P-201ENST00000516704 160 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 AC233702.9-201ENST00000581528 203 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 AC234782.5-201ENST00000617723 324 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 AL929601.4-201ENST00000613011 1341 ntBASIC6.26□□□□□ -1.41
SCAPERQ9BY12 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCAPERQ9BY12 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 SYF2P2-201ENST00000417620 583 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC108751.2-201ENST00000469993 231 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC093014.1-201ENST00000548926 724 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC093524.1-201ENST00000564266 1094 ntBASIC6.25□□□□□ -1.41
SCAPERQ9BY12 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SCAPERQ9BY12 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms