Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC141257.3-201ENST00000572906 215 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC015911.5-201ENST00000587076 451 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC087763.1-201ENST00000603391 286 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AP004372.1-201ENST00000604842 844 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 KATNBL1P5-201ENST00000605015 517 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC110741.2-201ENST00000605278 268 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC009163.6-201ENST00000612367 342 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 RMST_5.1-201ENST00000618704 126 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AL133370.2-201ENST00000619934 439 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC026124.2-201ENST00000621847 656 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AC112694.2-201ENST00000623697 768 ntBASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC28BQ9BUN5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 USP9YP4-201ENST00000424401 1745 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 RNU1-106P-201ENST00000384382 164 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 MIR621-201ENST00000384919 96 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 SDHCP2-201ENST00000398565 501 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AL356057.1-202ENST00000402263 756 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 RN7SKP56-201ENST00000410513 331 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 RNA5SP306-201ENST00000411087 107 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AP000534.2-201ENST00000412729 568 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 CYP4F29P-201ENST00000420685 446 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC007559.1-201ENST00000428736 355 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 PRELID3BP10-201ENST00000431957 584 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC092647.3-201ENST00000443044 633 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AL157884.3-201ENST00000448273 1184 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 MTND2P39-201ENST00000457230 764 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 CABYRP1-201ENST00000465493 1045 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 RN7SL808P-201ENST00000496066 299 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 PHBP17-201ENST00000528576 541 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC144521.1-201ENST00000607148 956 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 U3.53-201ENST00000628922 216 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 CPHL1P-201ENST00000461341 3407 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 AL451142.2-201ENST00000429076 2090 ntBASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC28BQ9BUN5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC110792.3-201ENST00000595906 1614 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC093311.1-201ENST00000506586 2021 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC011155.1-201ENST00000316512 456 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 RNU1-89P-201ENST00000384592 164 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 RSU1P3-201ENST00000412878 835 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 NRBF2P3-201ENST00000432731 865 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC007563.3-201ENST00000433233 371 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AL353597.2-202ENST00000434901 373 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 XKRY2-201ENST00000442362 1093 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC007000.2-201ENST00000442564 487 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC239809.1-201ENST00000450470 217 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC243772.1-201ENST00000451620 410 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 MTND3P3-201ENST00000505004 126 ntBASIC4.35□□□□□ -1.71
CCDC28BQ9BUN5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms