Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSPG4P5Q96PW8 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
CSPG4P5Q96PW8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CSPG4P5Q96PW8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CSPG4P5Q96PW8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CSPG4P5Q96PW8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CSPG4P5Q96PW8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CSPG4P5Q96PW8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CSPG4P5Q96PW8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 RNU6-178P-201ENST00000384631 104 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 RNA5SP36-201ENST00000410197 133 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 RN7SKP235-201ENST00000410662 305 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AC009302.1-201ENST00000417147 390 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 OR6C71P-201ENST00000432580 913 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 MTND2P2-201ENST00000434633 945 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 RPS3AP54-201ENST00000435535 734 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 CBX1P1-201ENST00000440184 427 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 RAB28P3-201ENST00000448325 597 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AL592156.1-201ENST00000508758 304 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 RNA5SP73-201ENST00000516744 108 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AC027176.2-201ENST00000559166 746 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 CYP4A43P-201ENST00000568156 121 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AC115989.2-201ENST00000578640 563 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AL031666.3-201ENST00000609320 1006 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AL589935.2-201ENST00000616471 1231 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AC105105.5-201ENST00000622635 1294 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 AP003497.2-201ENST00000624220 967 ntBASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSPG4P5Q96PW8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 OR10AB1P-202ENST00000641219 1686 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 RNU1-14P-201ENST00000362759 152 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 DNAJC19P7-201ENST00000428811 344 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 SERPINA7P1-201ENST00000443077 631 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AC099063.2-201ENST00000446360 662 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AC011276.1-201ENST00000469688 323 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 PPM1AP1-201ENST00000502740 1135 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 BNIP3P41-201ENST00000503774 571 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 PGBD4P4-201ENST00000509673 613 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 RNA5SP49-201ENST00000516450 115 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 RNA5SP519-201ENST00000516480 119 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 HMGB3P26-201ENST00000560051 582 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 MIR432-201ENST00000606207 94 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 AC138907.10-201ENST00000623708 983 ntBASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CSPG4P5Q96PW8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 RNU1-132P-201ENST00000364300 164 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 RNA5SP509-201ENST00000364577 119 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 MIR1179-201ENST00000408703 91 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 P2RY10P2-201ENST00000416730 913 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 CASP3P1-201ENST00000446037 609 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 AC069277.2-201ENST00000454211 432 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 AC022336.1-201ENST00000475510 337 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 AC008958.1-201ENST00000511047 682 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 NDUFB4P12-201ENST00000513465 390 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 OR8X1P-201ENST00000534542 869 ntBASIC4.38□□□□□ -1.71
CSPG4P5Q96PW8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms