Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC109635.6-201ENST00000525487 1113 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC124068.1-201ENST00000563131 678 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 MIR4697-201ENST00000582977 78 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC115286.1-201ENST00000604298 434 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC020634.1-201ENST00000608701 549 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC074276.2-201ENST00000619891 348 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC015722.2-201ENST00000622210 551 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC097504.1-201ENST00000515103 2415 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC010329.2-201ENST00000595195 2737 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 AC026951.1-201ENST00000559530 2459 ntBASIC4.13□□□□□ -1.75
COL21A1Q96P44 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 MIR141-201ENST00000384975 95 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 SNORA74C-2-201ENST00000411179 201 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC016397.1-201ENST00000412463 242 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 GAPDHP49-201ENST00000421421 961 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 NPM1P26-201ENST00000426339 738 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 RPL12P28-201ENST00000430852 489 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC009220.1-201ENST00000451614 275 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 snoU13.1-201ENST00000459157 104 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 RPL21P126-201ENST00000470049 478 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC006463.2-201ENST00000473326 348 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 STRADBP1-201ENST00000478954 1281 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 RPS6P4-201ENST00000494693 758 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 HNRNPKP5-201ENST00000515300 253 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 PDCD5P1-201ENST00000543528 309 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 MIR4715-201ENST00000584117 79 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC019131.2-201ENST00000609071 870 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 AL023881.1-201ENST00000621088 301 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 AC012020.1-201ENST00000624541 1728 ntBASIC4.12□□□□□ -1.75
COL21A1Q96P44 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
COL21A1Q96P44 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL21A1Q96P44 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 MAPK10-304ENST00000641341 3984 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AL137100.1-201ENST00000556703 1620 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 SPATA2P1-201ENST00000431223 2055 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 RNA5SP502-201ENST00000362694 119 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 GCNT6-201ENST00000379591 934 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AL136131.1-201ENST00000406079 803 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC068287.1-201ENST00000430283 295 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 RPEP2-201ENST00000432149 701 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 ELOCP18-201ENST00000434209 337 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms