Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC084024.2-201ENST00000503480 791 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC124293.1-201ENST00000530034 493 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC008083.2-201ENST00000546707 476 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC002400.1-201ENST00000569310 726 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AP005136.1-201ENST00000579765 429 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC090527.3-201ENST00000619041 548 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AL157770.1-201ENST00000623049 439 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 U6.107-201ENST00000637108 79 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 AC011493.1-201ENST00000596753 1632 ntBASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4AQ8WYN0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 MTCO1P6-201ENST00000481192 1384 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RN7SKP269-201ENST00000365545 319 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 Y_RNA.465-201ENST00000384293 102 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 SNORA77-201ENST00000408716 125 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RNA5SP178-201ENST00000410380 128 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RN7SKP59-201ENST00000410520 314 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC092745.2-202ENST00000411880 369 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC234781.4-201ENST00000419384 244 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 SEPT2P1-201ENST00000419651 180 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC108075.1-201ENST00000424692 529 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 MTND1P32-201ENST00000433043 938 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AL445567.1-201ENST00000439121 144 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC092393.1-201ENST00000439625 742 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AL929288.2-201ENST00000446368 407 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RPS4XP1-201ENST00000482189 787 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC104687.1-201ENST00000485829 412 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RN7SL441P-201ENST00000492388 296 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC073073.1-201ENST00000493920 463 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC023424.1-201ENST00000496058 459 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 SUMO2P4-201ENST00000504193 276 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 HMGB3P16-201ENST00000508037 287 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 MTND4LP31-201ENST00000514859 294 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC116553.2-201ENST00000564203 463 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 MIR4472-2-201ENST00000582069 67 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 MIR548Y-201ENST00000582739 110 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC068790.7-201ENST00000602347 528 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AC006363.1-201ENST00000603806 463 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AL135786.2-201ENST00000608422 615 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 AL592148.2-201ENST00000612210 372 ntBASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4AQ8WYN0 TTC39DP-201ENST00000416781 1688 ntBASIC5.21□□□□□ -1.57
ATG4AQ8WYN0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms